SMTL ID : 6opn.1

CD4- and 17-bound HIV-1 Env B41 SOSIP in complex with small molecule GO35

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-3-3-3-mer
Ligands
3 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
3 x NAG- NAG- BMA- MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
27 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
3 x N07: [3'-(5-methyl-1,3,4-oxadiazol-2-yl)[1,1'-biphenyl]-3-yl](piperidin-1-yl)methanone(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Ozorowski, G. et al., A Strain-Specific Inhibitor of Receptor-Bound HIV-1 Targets a Pocket near the Fusion Peptide. Cell Rep (2020)
Release Date
2020-10-21
Peptides
Envelope glycoprotein gp160: ADG
Envelope glycoprotein gp41: BEH
T-cell surface glycoprotein CD4: CFI
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
D
D
G
G
B
B
E
E
H
H
C
C
F
F
I
I

Envelope glycoprotein gp160

Toggle Identical (ADG)

Envelope glycoprotein gp41

Toggle Identical (BEH)

T-cell surface glycoprotein CD4

Toggle Identical (CFI)

Related Entries With Identical Sequence

5vn3.1 | 5vn8.1 | 6ch9.1 | 6edu.1 | 6muf.1 | 6mug.1 | 6okp.1 | 6opo.1 | 6opp.1 | 6opq.1 | 6u59.1 | 6x5b.1 | 6x5c.1 | 8d5c.1