SMTL ID : 6p59.2 (1 other biounit)

Crystal structure of SIVrcm Vif-CBFbeta-ELOB-ELOC complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.94 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.1: 2 residues within 4Å: Chain A: R.52 Chain D: N.75 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.52

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain D: H.115, C.121, C.139, H.145 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:H.115, D:C.121, D:C.139, D:H.145

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain D: R.143, H.208, F.209, S.211, Y.214 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:R.143, D:F.209, D:S.211

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Binning, J.M. et al., Structural Basis for a Species-Specific Determinant of an SIV Vif Protein toward Hominid APOBEC3G Antagonism. Cell Host Microbe (2019)

Release Date

2019-12-25

Peptides

Core-binding factor subunit beta: A
Elongin-B: B
Elongin-C: C
Virion infectivity factor: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

C
E

D
B

Core-binding factor subunit beta

Elongin-B

Elongin-C

Virion infectivity factor

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