SMTL ID : 4b95.1 (3 other biounits)

pVHL-EloB-EloB-EloC complex_(2S,4R)-1-(2-chlorophenyl)carbonyl-N-[(4-chlorophenyl)methyl]-4-oxidanyl-pyrrolidine-2-carboxamide bound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 4 residues within 4Å: Chain A: I.34 Chain B: Y.3, I.15, N.43 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:N.43

1 x UCK: (2S,4R)-1-(2-chlorophenyl)carbonyl-N-[(4-chlorophenyl)methyl]-4-oxidanyl-pyrrolidine-2-carboxamide

UCK.2: 12 residues within 4Å: Chain C: W.37, F.40, Q.45, Y.47, P.48, R.56, I.58, H.59, S.60, Y.61, H.64, W.66 12 PLIP interactions: 12 interactions with chain C Hydrophobic interactions: C:W.37, C:F.40, C:Y.47, C:Y.47, C:I.58, C:I.58, C:Y.61, C:W.66 Hydrogen bonds: C:H.59, C:S.60, C:H.64 Halogen bonds: C:P.48

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Buckley, D.L. et al., Small-Molecule Inhibitors of the Interaction between the E3 Ligase Vhl and Hif1Alpha. Angew.Chem.Int.Ed.Engl. (2012)

Release Date

2012-10-24

Peptides

TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2: A
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1: B
VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2

TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1

VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR

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