SMTL ID : 6ph7.2 (1 other biounit)

Crystal structure of bovine opsin with nerol bound

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.90 Å
Oligo State
hetero-2-2-mer
Ligands
2 x NAG- NAG- BMA- BMA: beta-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
2 x BOG: octyl beta-D-glucopyranoside(Non-covalent)
2 x PLM: PALMITIC ACID(Covalent)
2 x NZZ: (2Z)-3,7-dimethylocta-2,6-dien-1-ol(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Morizumi, T. et al., Odorant-binding site in visual opsin. To Be Published
Release Date
2020-07-01
Peptides
Rhodopsin: AC
G protein CT2 peptide: BD
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
C
A
B
B
D
B
Membrane
We predict this structure to be a membrane protein.

Rhodopsin

Toggle Identical (AC)

G protein CT2 peptide

Toggle Identical (BD)

Related Entries With Identical Sequence

1f88.1 | 1f88.2 | 1f88.3 | 1jfp.1 | 1ln6.1 | 3c9l.1 | 3cap.1 | 3dqb.1 | 3pqr.1 | 3pqr.2 | 3pxo.1 | 4j4q.1 | 4pxf.1 | 4x1h.1 | 5en0.1 | 5te3.1 | 5te3.2 | 5wkt.1 | 6nwe.1 | 6ofj.1 | 6oy9.1 | 6oya.1 | 6pel.1 | 6pgs.1 | 6ph7.1 | 7mt8.1 | 7mt9.1 | 7mta.1 | 7mtb.1