SMTL ID : 7mt8.1

Rhodopsin kinase (GRK1)-S5E/S488E/T489E in complex with rhodopsin

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

1 x SGV: SANGIVAMYCIN(Non-covalent)

SGV.1: 11 residues within 4Å: Chain A: L.193, G.194, G.196, V.201, A.214, M.264, M.267, D.271, L.321, A.478, K.479 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:A.214, A:L.321 Hydrogen bonds: A:D.271, A:K.479

1 x RET: RETINAL(Covalent)

RET.2: 13 residues within 4Å: Chain B: A.117, E.122, E.181, Y.191, M.207, F.208, H.211, F.212, W.265, Y.268, A.269, A.272, K.296 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:Y.191, B:H.211, B:F.212, B:W.265, B:Y.268, B:Y.268, B:A.269, B:A.272, B:K.296

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, Q. et al., Structures of rhodopsin in complex with G-protein-coupled receptor kinase 1. Nature (2021)

Release Date

2021-07-07

Peptides

Rhodopsin kinase GRK1: A
Rhodopsin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
G

B
R

Membrane

We predict this structure to be a membrane protein.
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Rhodopsin kinase GRK1

Rhodopsin

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