SMTL ID : 6qju.1 (1 other biounit)

Crystal structure of human Bromodomain containing protein 3 (BRD3) in complex with 3-bromo-1H-indazol-5-amine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

monomer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 1 residues within 4Å: Chain A: Y.94 No protein-ligand interaction detected (PLIP) EDO.2: 3 residues within 4Å: Chain A: Q.33, W.36, M.104 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.33

1 x SCN: THIOCYANATE ION(Non-functional Binders)

SCN.3: 4 residues within 4Å: Chain A: K.67, R.68, N.71, Y.73 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.71

1 x J58: 3-bromanyl-2~{H}-indazol-5-amine(Non-covalent)

J58.4: 8 residues within 4Å: Chain A: P.37, V.42, L.49, Y.52, N.90, C.91, Y.94, N.95 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.42, A:Y.52, A:Y.94, A:Y.94 Hydrogen bonds: A:N.90 Water bridges: A:N.90, A:C.91 Halogen bonds: A:P.37

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Braun, M.B. et al., Br-O-modomain (BRD3) halogen binding to a small molecule. To Be Published

Release Date

2020-02-12

Peptides

Bromodomain-containing protein 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 3

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