SMTL ID : 6qju.2 (1 other biounit)

Crystal structure of human Bromodomain containing protein 3 (BRD3) in complex with 3-bromo-1H-indazol-5-amine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: I.55, I.56, K.57, N.58, N.90 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:I.55, A:K.57, A:N.58, A:N.58, A:N.90

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 6 residues within 4Å: Chain A: F.38, V.42, L.47, C.91, N.95, I.101 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.95

2 x NA: SODIUM ION(Non-functional Binders)

NA.3: 3 residues within 4Å: Chain A: Y.92, I.93, N.95 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:I.93 NA.4: 4 residues within 4Å: Chain A: T.15, N.16, Q.17, E.122 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.16, A:N.16, A:Q.17 Water bridges: A:T.15

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Braun, M.B. et al., Br-O-modomain (BRD3) halogen binding to a small molecule. To Be Published

Release Date

2020-02-12

Peptides

Bromodomain-containing protein 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Bromodomain-containing protein 3

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