SMTL ID : 7laz.1 (1 other biounit)

Crystal structure of the first bromodomain (BD1) of human BRD3 bound to ERK5-IN-1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x VYJ: 11-cyclopentyl-2-({2-ethoxy-4-[4-(4-methylpiperazin-1-yl)piperidine-1-carbonyl]phenyl}amino)-5-methyl-5,11-dihydro-6H-pyrimido[4,5-b][1,4]benzodiazepin-6-one(Non-covalent)

VYJ.1: 11 residues within 4Å: Chain A: W.36, P.37, F.38, Q.40, V.42, K.46, L.47, L.49, Y.94, N.95, I.101 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:W.36, A:P.37, A:L.47, A:L.49, A:Y.94, A:I.101, A:I.101 Hydrogen bonds: A:N.95 pi-Stacking: A:W.36

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Karim, R.M. et al., Differential BET Bromodomain Inhibition by Dihydropteridinone and Pyrimidodiazepinone Kinase Inhibitors. J.Med.Chem. (2021)

Release Date

2021-07-14

Peptides

Bromodomain-containing protein 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 3

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