SMTL ID : 6t59.1

Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer

Ligands

220 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)

MG.1: 2 residues within 4Å: Chain O: Y.130, R.131 1 PLIP interactions: 1 interactions with chain O Metal complexes: O:Y.130 MG.2: 3 residues within 4Å: Chain O: R.62, N.64 Chain j: U.2589 1 PLIP interactions: 1 interactions with chain O Metal complexes: O:R.62 MG.3: 2 residues within 4Å: Chain U: N.50 Chain j: U.2244 No protein-ligand interaction detected (PLIP) MG.4: 1 residues within 4Å: Chain Z: H.25 1 PLIP interactions: 1 interactions with chain Z Metal complexes: Z:H.25 MG.6: 5 residues within 4Å: Chain 5: G.55, T.70, K.71, H.73 Chain j: G.1976 2 PLIP interactions: 2 interactions with chain 5 Metal complexes: 5:G.55, 5:T.70 MG.8: 1 residues within 4Å: Chain j: G.54 No protein-ligand interaction detected (PLIP) MG.12: 3 residues within 4Å: Chain B: K.373 Chain j: U.3196, A.3234 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:K.373 MG.13: 2 residues within 4Å: Chain I: N.14 Chain j: G.1400 No protein-ligand interaction detected (PLIP) MG.14: 2 residues within 4Å: Chain j: A.1241, G.1387 No protein-ligand interaction detected (PLIP) MG.15: 3 residues within 4Å: Chain P: N.7 Chain j: C.1225, G.1248 1 PLIP interactions: 1 interactions with chain P Metal complexes: P:N.7 MG.16: 5 residues within 4Å: Chain Z: K.7, G.18 Chain j: A.1386, G.1675, G.1676 1 PLIP interactions: 1 interactions with chain Z Metal complexes: Z:G.18 MG.17: 3 residues within 4Å: Chain j: A.883, G.1416, C.1417 No protein-ligand interaction detected (PLIP) MG.18: 3 residues within 4Å: Chain 8: Q.30 Chain j: A.1092, A.1093 No protein-ligand interaction detected (PLIP) MG.19: 4 residues within 4Å: Chain C: G.98, G.99 Chain j: G.350, C.352 No protein-ligand interaction detected (PLIP) MG.20: 2 residues within 4Å: Chain j: U.37, U.2612 No protein-ligand interaction detected (PLIP) MG.21: 4 residues within 4Å: Chain j: U.37, A.38, G.40, C.41 No protein-ligand interaction detected (PLIP) MG.22: 4 residues within 4Å: Chain M: V.85 Chain j: U.43, A.44, U.45 No protein-ligand interaction detected (PLIP) MG.23: 5 residues within 4Å: Ligands: MG.39 Chain j: U.45, G.48, U.96, G.286 No protein-ligand interaction detected (PLIP) MG.24: 1 residues within 4Å: Chain j: A.51 No protein-ligand interaction detected (PLIP) MG.25: 1 residues within 4Å: Chain j: A.56 No protein-ligand interaction detected (PLIP) MG.26: 1 residues within 4Å: Chain j: A.61 No protein-ligand interaction detected (PLIP) MG.27: 3 residues within 4Å: Chain j: A.62, C.326, U.327 No protein-ligand interaction detected (PLIP) MG.28: 3 residues within 4Å: Chain j: G.85, G.941, C.942 No protein-ligand interaction detected (PLIP) MG.29: 1 residues within 4Å: Chain j: C.100 No protein-ligand interaction detected (PLIP) MG.30: 2 residues within 4Å: Chain j: A.105, G.107 No protein-ligand interaction detected (PLIP) MG.31: 4 residues within 4Å: Chain j: C.112, G.154, C.155, G.156 No protein-ligand interaction detected (PLIP) MG.32: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.33: 1 residues within 4Å: Chain j: G.234 No protein-ligand interaction detected (PLIP) MG.34: 2 residues within 4Å: Chain j: G.223, A.229 No protein-ligand interaction detected (PLIP) MG.35: 3 residues within 4Å: Chain j: C.204, U.225, A.229 No protein-ligand interaction detected (PLIP) MG.36: 1 residues within 4Å: Chain j: C.276 No protein-ligand interaction detected (PLIP) MG.37: 3 residues within 4Å: Chain M: Q.91 Chain j: U.281, G.282 No protein-ligand interaction detected (PLIP) MG.38: 2 residues within 4Å: Chain j: U.45, U.285 No protein-ligand interaction detected (PLIP) MG.39: 5 residues within 4Å: Ligands: MG.23 Chain j: U.46, A.47, G.48, U.285 No protein-ligand interaction detected (PLIP) MG.40: 3 residues within 4Å: Chain j: U.310, U.2922, U.2923 No protein-ligand interaction detected (PLIP) MG.41: 1 residues within 4Å: Ligands: MG.182 No protein-ligand interaction detected (PLIP) MG.42: 3 residues within 4Å: Chain j: C.344, C.345, G.1735 No protein-ligand interaction detected (PLIP) MG.43: 2 residues within 4Å: Chain j: G.350, A.353 No protein-ligand interaction detected (PLIP) MG.44: 3 residues within 4Å: Ligands: MG.144 Chain j: A.377, A.1724 No protein-ligand interaction detected (PLIP) MG.45: 1 residues within 4Å: Chain j: G.1723 No protein-ligand interaction detected (PLIP) MG.46: 4 residues within 4Å: Chain j: A.404, G.409, U.410, G.1723 No protein-ligand interaction detected (PLIP) MG.47: 4 residues within 4Å: Chain j: C.408, G.409, U.410, G.411 No protein-ligand interaction detected (PLIP) MG.48: 4 residues within 4Å: Chain j: G.417, U.418 Chain l: A.9, G.10 No protein-ligand interaction detected (PLIP) MG.49: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.50: 2 residues within 4Å: Chain j: A.1671, G.1672 No protein-ligand interaction detected (PLIP) MG.51: 1 residues within 4Å: Chain j: A.1674 No protein-ligand interaction detected (PLIP) MG.52: 2 residues within 4Å: Chain j: A.1759, A.2190 No protein-ligand interaction detected (PLIP) MG.53: 2 residues within 4Å: Chain j: A.1762, U.2218 No protein-ligand interaction detected (PLIP) MG.54: 3 residues within 4Å: Chain j: U.1761, C.1785, C.2210 No protein-ligand interaction detected (PLIP) MG.55: 1 residues within 4Å: Chain j: A.1793 No protein-ligand interaction detected (PLIP) MG.56: 3 residues within 4Å: Chain j: C.1802, C.1803, A.1820 No protein-ligand interaction detected (PLIP) MG.57: 2 residues within 4Å: Chain j: C.1814, A.1815 No protein-ligand interaction detected (PLIP) MG.58: 3 residues within 4Å: Chain j: C.1837, C.1838, G.1902 No protein-ligand interaction detected (PLIP) MG.59: 2 residues within 4Å: Chain j: G.1906, G.1908 No protein-ligand interaction detected (PLIP) MG.60: 1 residues within 4Å: Chain j: G.2069 No protein-ligand interaction detected (PLIP) MG.61: 4 residues within 4Å: Chain 5: R.10 Chain j: G.1794, A.2175, C.2176 No protein-ligand interaction detected (PLIP) MG.62: 3 residues within 4Å: Chain j: A.2181, G.2219, U.2220 No protein-ligand interaction detected (PLIP) MG.63: 2 residues within 4Å: Chain j: C.2183, C.2184 No protein-ligand interaction detected (PLIP) MG.64: 4 residues within 4Å: Chain j: G.1158, A.1159, G.2185, C.2186 No protein-ligand interaction detected (PLIP) MG.65: 5 residues within 4Å: Chain j: A.2237, G.2238, G.2239, G.2240, G.2536 No protein-ligand interaction detected (PLIP) MG.66: 1 residues within 4Å: Chain j: A.2249 No protein-ligand interaction detected (PLIP) MG.67: 4 residues within 4Å: Chain j: A.2262, A.2271, G.2325, A.2326 No protein-ligand interaction detected (PLIP) MG.68: 3 residues within 4Å: Chain j: C.2329, C.2479, U.2519 No protein-ligand interaction detected (PLIP) MG.69: 2 residues within 4Å: Chain j: C.2333, U.2334 No protein-ligand interaction detected (PLIP) MG.70: 3 residues within 4Å: Chain j: A.2339, U.2341, U.2342 No protein-ligand interaction detected (PLIP) MG.71: 4 residues within 4Å: Chain j: C.2398, U.2401, G.2402, U.2442 No protein-ligand interaction detected (PLIP) MG.72: 5 residues within 4Å: Chain j: G.2386, A.2444, A.2445, C.2446, U.2515 No protein-ligand interaction detected (PLIP) MG.73: 1 residues within 4Å: Chain j: G.2448 No protein-ligand interaction detected (PLIP) MG.74: 2 residues within 4Å: Chain j: U.2475, A.2476 No protein-ligand interaction detected (PLIP) MG.75: 2 residues within 4Å: Chain j: A.2480, G.2503 No protein-ligand interaction detected (PLIP) MG.76: 4 residues within 4Å: Chain j: G.2395, C.2396, A.2444, A.2514 No protein-ligand interaction detected (PLIP) MG.77: 4 residues within 4Å: Chain j: A.1755, A.2549, U.2550, G.2592 No protein-ligand interaction detected (PLIP) MG.78: 3 residues within 4Å: Chain j: C.886, A.2574, G.2576 No protein-ligand interaction detected (PLIP) MG.79: 2 residues within 4Å: Chain j: C.1237, G.2610 No protein-ligand interaction detected (PLIP) MG.80: 3 residues within 4Å: Chain j: U.2609, C.2762, U.2763 No protein-ligand interaction detected (PLIP) MG.81: 3 residues within 4Å: Chain j: G.40, C.41, G.2613 No protein-ligand interaction detected (PLIP) MG.82: 2 residues within 4Å: Chain j: A.2614, U.2758 No protein-ligand interaction detected (PLIP) MG.83: 2 residues within 4Å: Chain j: A.2755, U.2757 No protein-ligand interaction detected (PLIP) MG.84: 3 residues within 4Å: Chain A: P.206 Chain j: U.2617, G.2753 No protein-ligand interaction detected (PLIP) MG.85: 2 residues within 4Å: Chain j: A.2620, C.2621 No protein-ligand interaction detected (PLIP) MG.86: 2 residues within 4Å: Chain j: U.35, U.2757 No protein-ligand interaction detected (PLIP) MG.87: 3 residues within 4Å: Chain j: U.1271, U.2779, C.2780 No protein-ligand interaction detected (PLIP) MG.88: 3 residues within 4Å: Chain j: A.2783, C.2784, G.2786 No protein-ligand interaction detected (PLIP) MG.89: 5 residues within 4Å: Chain j: G.2804, G.2805, G.2852, G.2900, C.2901 No protein-ligand interaction detected (PLIP) MG.90: 1 residues within 4Å: Chain j: A.2808 No protein-ligand interaction detected (PLIP) MG.91: 2 residues within 4Å: Chain j: A.2808, A.2850 No protein-ligand interaction detected (PLIP) MG.92: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.93: 2 residues within 4Å: Chain j: A.2954, A.3102 No protein-ligand interaction detected (PLIP) MG.94: 3 residues within 4Å: Chain j: G.1192, G.1200, G.3103 No protein-ligand interaction detected (PLIP) MG.95: 5 residues within 4Å: Chain A: A.203, N.205 Chain j: A.1191, G.1192, A.3104 No protein-ligand interaction detected (PLIP) MG.96: 1 residues within 4Å: Chain j: A.3102 No protein-ligand interaction detected (PLIP) MG.97: 2 residues within 4Å: Chain j: G.2961, G.3017 No protein-ligand interaction detected (PLIP) MG.98: 6 residues within 4Å: Chain j: G.2962, A.2963, U.2964, C.3012, C.3013, U.3014 No protein-ligand interaction detected (PLIP) MG.99: 4 residues within 4Å: Chain j: U.881, G.882, A.2963, U.3014 No protein-ligand interaction detected (PLIP) MG.100: 3 residues within 4Å: Chain j: U.2968, G.2969, G.2970 No protein-ligand interaction detected (PLIP) MG.101: 2 residues within 4Å: Chain j: C.2986, U.2989 No protein-ligand interaction detected (PLIP) MG.102: 1 residues within 4Å: Chain j: A.1407 No protein-ligand interaction detected (PLIP) MG.103: 3 residues within 4Å: Chain j: A.2599, U.3019, G.3020 No protein-ligand interaction detected (PLIP) MG.104: 3 residues within 4Å: Chain j: A.2600, A.3018, G.3020 No protein-ligand interaction detected (PLIP) MG.105: 1 residues within 4Å: Chain j: A.3048 No protein-ligand interaction detected (PLIP) MG.106: 2 residues within 4Å: Chain j: G.2243, U.2244 No protein-ligand interaction detected (PLIP) MG.107: 5 residues within 4Å: Chain j: A.2242, G.2243, U.2244, A.3065, U.3066 No protein-ligand interaction detected (PLIP) MG.108: 2 residues within 4Å: Chain j: C.2530, U.3066 No protein-ligand interaction detected (PLIP) MG.109: 3 residues within 4Å: Chain j: G.3020, G.3091, U.3126 No protein-ligand interaction detected (PLIP) MG.110: 4 residues within 4Å: Chain j: C.3022, C.3088, G.3089, U.3090 No protein-ligand interaction detected (PLIP) MG.111: 3 residues within 4Å: Chain B: R.4, S.7 Chain j: G.3084 No protein-ligand interaction detected (PLIP) MG.112: 2 residues within 4Å: Chain j: A.3033, U.3034 No protein-ligand interaction detected (PLIP) MG.113: 4 residues within 4Å: Chain j: G.2595, U.3090, G.3091, A.3092 No protein-ligand interaction detected (PLIP) MG.114: 3 residues within 4Å: Chain B: K.243 Chain j: G.1151, U.3095 No protein-ligand interaction detected (PLIP) MG.115: 4 residues within 4Å: Chain j: G.3096, G.3097, G.3098, G.3123 No protein-ligand interaction detected (PLIP) MG.116: 3 residues within 4Å: Chain j: G.2512, U.2515, G.3107 No protein-ligand interaction detected (PLIP) MG.117: 2 residues within 4Å: Chain j: G.1151, C.1153 No protein-ligand interaction detected (PLIP) MG.118: 1 residues within 4Å: Chain j: G.1154 No protein-ligand interaction detected (PLIP) MG.119: 2 residues within 4Å: Chain j: A.3250, A.3276 No protein-ligand interaction detected (PLIP) MG.120: 1 residues within 4Å: Chain j: A.3274 No protein-ligand interaction detected (PLIP) MG.121: 2 residues within 4Å: Chain j: U.3254, C.3267 No protein-ligand interaction detected (PLIP) MG.122: 1 residues within 4Å: Chain j: G.3219 No protein-ligand interaction detected (PLIP) MG.123: 2 residues within 4Å: Chain j: U.3315, U.3426 No protein-ligand interaction detected (PLIP) MG.124: 2 residues within 4Å: Chain F: N.98 Chain j: G.1431 No protein-ligand interaction detected (PLIP) MG.125: 1 residues within 4Å: Chain j: U.1215 No protein-ligand interaction detected (PLIP) MG.126: 2 residues within 4Å: Chain j: G.1239, G.1389 No protein-ligand interaction detected (PLIP) MG.127: 2 residues within 4Å: Chain j: C.879, U.1218 No protein-ligand interaction detected (PLIP) MG.128: 3 residues within 4Å: Chain j: C.316, G.2924, G.2925 No protein-ligand interaction detected (PLIP) MG.129: 3 residues within 4Å: Ligands: MG.131 Chain j: U.410, G.411 No protein-ligand interaction detected (PLIP) MG.130: 5 residues within 4Å: Ligands: MG.143 Chain j: A.347, U.348, A.372, G.373 No protein-ligand interaction detected (PLIP) MG.131: 3 residues within 4Å: Ligands: MG.129 Chain j: U.374, U.410 No protein-ligand interaction detected (PLIP) MG.132: 2 residues within 4Å: Chain j: G.896, C.1738 No protein-ligand interaction detected (PLIP) MG.133: 2 residues within 4Å: Chain j: G.890, A.2562 No protein-ligand interaction detected (PLIP) MG.134: 1 residues within 4Å: Chain j: G.2577 No protein-ligand interaction detected (PLIP) MG.135: 2 residues within 4Å: Chain j: G.2596, A.3128 No protein-ligand interaction detected (PLIP) MG.136: 2 residues within 4Å: Chain j: A.1755, G.1756 No protein-ligand interaction detected (PLIP) MG.137: 3 residues within 4Å: Chain j: U.881, G.882, G.1229 No protein-ligand interaction detected (PLIP) MG.138: 3 residues within 4Å: Chain K: S.4 Chain j: C.1384, U.1385 No protein-ligand interaction detected (PLIP) MG.139: 4 residues within 4Å: Chain j: G.2474, G.2512, A.2513, U.2515 No protein-ligand interaction detected (PLIP) MG.140: 2 residues within 4Å: Chain j: G.2604, G.3017 No protein-ligand interaction detected (PLIP) MG.141: 3 residues within 4Å: Chain j: G.1791, G.1792, A.2179 No protein-ligand interaction detected (PLIP) MG.142: 3 residues within 4Å: Chain j: U.2218, U.2221, G.2222 No protein-ligand interaction detected (PLIP) MG.143: 5 residues within 4Å: Ligands: MG.130, MG.220 Chain j: A.347, U.348, A.372 No protein-ligand interaction detected (PLIP) MG.144: 2 residues within 4Å: Ligands: MG.44 Chain j: A.1724 No protein-ligand interaction detected (PLIP) MG.145: 4 residues within 4Å: Chain j: G.1085, G.1184, A.1201, A.2614 No protein-ligand interaction detected (PLIP) MG.146: 4 residues within 4Å: Chain j: G.1213, A.1238, G.1239, U.2611 No protein-ligand interaction detected (PLIP) MG.147: 4 residues within 4Å: Chain 0: S.4, K.5 Chain j: G.1390, G.1391 No protein-ligand interaction detected (PLIP) MG.148: 2 residues within 4Å: Chain j: A.1273, A.1274 No protein-ligand interaction detected (PLIP) MG.149: 3 residues within 4Å: Chain j: G.2974, U.2975, G.2977 No protein-ligand interaction detected (PLIP) MG.150: 1 residues within 4Å: Chain j: C.3281 No protein-ligand interaction detected (PLIP) MG.151: 2 residues within 4Å: Chain j: G.1240, U.1388 No protein-ligand interaction detected (PLIP) MG.152: 5 residues within 4Å: Chain j: U.900, A.1074, G.1075, A.1077, C.1078 No protein-ligand interaction detected (PLIP) MG.153: 1 residues within 4Å: Chain j: U.909 No protein-ligand interaction detected (PLIP) MG.154: 1 residues within 4Å: Chain j: C.1080 No protein-ligand interaction detected (PLIP) MG.155: 2 residues within 4Å: Chain j: A.1082, G.1210 No protein-ligand interaction detected (PLIP) MG.156: 4 residues within 4Å: Chain 3: D.42 Chain j: U.878, A.883, A.884 1 PLIP interactions: 1 interactions with chain 3 Metal complexes: 3:D.42 MG.157: 3 residues within 4Å: Chain j: U.1147, U.2342, A.2343 No protein-ligand interaction detected (PLIP) MG.158: 2 residues within 4Å: Chain j: U.2953, A.2954 No protein-ligand interaction detected (PLIP) MG.159: 2 residues within 4Å: Chain j: A.2605, A.2959 No protein-ligand interaction detected (PLIP) MG.160: 2 residues within 4Å: Chain j: A.1226, G.1672 No protein-ligand interaction detected (PLIP) MG.161: 1 residues within 4Å: Chain j: G.1740 No protein-ligand interaction detected (PLIP) MG.162: 1 residues within 4Å: Chain j: U.1441 No protein-ligand interaction detected (PLIP) MG.163: 2 residues within 4Å: Chain j: C.1434, G.1670 No protein-ligand interaction detected (PLIP) MG.164: 3 residues within 4Å: Chain W: R.56 Chain j: C.14, A.15 No protein-ligand interaction detected (PLIP) MG.165: 3 residues within 4Å: Chain j: U.878, C.888, G.1216 No protein-ligand interaction detected (PLIP) MG.166: 2 residues within 4Å: Chain j: A.1752, C.3130 No protein-ligand interaction detected (PLIP) MG.167: 3 residues within 4Å: Chain j: C.1415, U.1418, G.1419 No protein-ligand interaction detected (PLIP) MG.168: 2 residues within 4Å: Chain j: C.1417, A.1671 No protein-ligand interaction detected (PLIP) MG.169: 2 residues within 4Å: Chain j: A.341, C.927 No protein-ligand interaction detected (PLIP) MG.170: 2 residues within 4Å: Chain j: A.237, G.238 No protein-ligand interaction detected (PLIP) MG.171: 1 residues within 4Å: Chain j: G.235 No protein-ligand interaction detected (PLIP) MG.172: 2 residues within 4Å: Chain j: G.230, G.231 No protein-ligand interaction detected (PLIP) MG.173: 1 residues within 4Å: Chain j: G.207 No protein-ligand interaction detected (PLIP) MG.174: 1 residues within 4Å: Chain j: G.1133 No protein-ligand interaction detected (PLIP) MG.175: 3 residues within 4Å: Chain j: U.1097, A.1190, U.2336 No protein-ligand interaction detected (PLIP) MG.176: 2 residues within 4Å: Chain j: U.1097, G.1098 No protein-ligand interaction detected (PLIP) MG.177: 4 residues within 4Å: Chain j: A.1092, A.1093, C.1094, U.1095 No protein-ligand interaction detected (PLIP) MG.178: 1 residues within 4Å: Chain j: G.2146 No protein-ligand interaction detected (PLIP) MG.179: 3 residues within 4Å: Chain j: U.31, G.32, G.48 No protein-ligand interaction detected (PLIP) MG.180: 4 residues within 4Å: Chain j: G.32, A.33, G.48, C.283 No protein-ligand interaction detected (PLIP) MG.181: 2 residues within 4Å: Chain j: A.65, U.321 No protein-ligand interaction detected (PLIP) MG.182: 2 residues within 4Å: Ligands: MG.41 Chain j: A.322 No protein-ligand interaction detected (PLIP) MG.183: 1 residues within 4Å: Chain j: A.101 No protein-ligand interaction detected (PLIP) MG.184: 2 residues within 4Å: Chain j: G.91, C.92 No protein-ligand interaction detected (PLIP) MG.185: 1 residues within 4Å: Chain j: G.1408 No protein-ligand interaction detected (PLIP) MG.186: 4 residues within 4Å: Chain j: A.887, C.888, A.3018, U.3019 No protein-ligand interaction detected (PLIP) MG.187: 4 residues within 4Å: Chain j: C.1234, C.1235, G.2946, A.2947 No protein-ligand interaction detected (PLIP) MG.188: 3 residues within 4Å: Chain j: A.1424, U.1425, G.1426 No protein-ligand interaction detected (PLIP) MG.189: 2 residues within 4Å: Chain j: G.1423, C.1451 No protein-ligand interaction detected (PLIP) MG.190: 1 residues within 4Å: Chain j: G.872 No protein-ligand interaction detected (PLIP) MG.191: 2 residues within 4Å: Chain j: G.2578, C.2579 No protein-ligand interaction detected (PLIP) MG.192: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.193: 1 residues within 4Å: Chain j: G.1440 No protein-ligand interaction detected (PLIP) MG.194: 1 residues within 4Å: Chain j: G.1185 No protein-ligand interaction detected (PLIP) MG.195: 2 residues within 4Å: Chain j: U.2031, G.2032 No protein-ligand interaction detected (PLIP) MG.196: 4 residues within 4Å: Chain j: A.2088, A.2089, G.2090, G.2109 No protein-ligand interaction detected (PLIP) MG.197: 1 residues within 4Å: Chain j: U.1911 No protein-ligand interaction detected (PLIP) MG.198: 5 residues within 4Å: Chain j: G.1835, C.1837, A.1903, G.1906, G.1907 No protein-ligand interaction detected (PLIP) MG.199: 3 residues within 4Å: Chain j: U.1836, G.1902 Chain l: U.110 No protein-ligand interaction detected (PLIP) MG.200: 3 residues within 4Å: Chain j: A.1845, C.1857, G.1858 No protein-ligand interaction detected (PLIP) MG.201: 3 residues within 4Å: Chain j: G.2752, G.2753, G.2754 No protein-ligand interaction detected (PLIP) MG.202: 2 residues within 4Å: Chain j: A.2237, G.2238 No protein-ligand interaction detected (PLIP) MG.203: 2 residues within 4Å: Chain j: G.3202, G.3232 No protein-ligand interaction detected (PLIP) MG.204: 3 residues within 4Å: Chain j: A.2553, G.2554, C.2555 No protein-ligand interaction detected (PLIP) MG.205: 3 residues within 4Å: Chain j: C.1138, C.1139, C.1169 No protein-ligand interaction detected (PLIP) MG.206: 4 residues within 4Å: Chain j: G.1136, U.1137, C.1138, C.1169 No protein-ligand interaction detected (PLIP) MG.207: 3 residues within 4Å: Chain j: G.3200, U.3201, G.3202 No protein-ligand interaction detected (PLIP) MG.208: 4 residues within 4Å: Ligands: MG.209 Chain j: G.3200, U.3201, G.3235 No protein-ligand interaction detected (PLIP) MG.209: 1 residues within 4Å: Ligands: MG.208 No protein-ligand interaction detected (PLIP) MG.210: 3 residues within 4Å: Chain j: A.3171, C.3172, G.3173 No protein-ligand interaction detected (PLIP) MG.211: 1 residues within 4Å: Chain l: U.18 No protein-ligand interaction detected (PLIP) MG.212: 3 residues within 4Å: Chain j: U.1704, A.1705 Chain l: A.9 No protein-ligand interaction detected (PLIP) MG.213: 1 residues within 4Å: Chain k: U.120 No protein-ligand interaction detected (PLIP) MG.214: 1 residues within 4Å: Chain k: G.113 No protein-ligand interaction detected (PLIP) MG.215: 2 residues within 4Å: Chain k: A.42, U.43 No protein-ligand interaction detected (PLIP) MG.216: 4 residues within 4Å: Chain k: U.20, U.53, A.54, A.55 No protein-ligand interaction detected (PLIP) MG.217: 3 residues within 4Å: Chain k: U.53, A.55, G.56 No protein-ligand interaction detected (PLIP) MG.218: 3 residues within 4Å: Chain k: G.64, G.65, G.66 No protein-ligand interaction detected (PLIP) MG.219: 4 residues within 4Å: Chain F: R.95 Chain j: C.1430, G.1431 Chain k: A.83 No protein-ligand interaction detected (PLIP) MG.220: 3 residues within 4Å: Ligands: MG.143 Chain j: G.373 Chain l: A.17 No protein-ligand interaction detected (PLIP) MG.221: 1 residues within 4Å: Chain l: C.35 No protein-ligand interaction detected (PLIP) MG.222: 1 residues within 4Å: Chain l: A.65 No protein-ligand interaction detected (PLIP) MG.223: 2 residues within 4Å: Chain l: C.47, A.52 No protein-ligand interaction detected (PLIP) MG.224: 2 residues within 4Å: Chain l: U.67, U.69 No protein-ligand interaction detected (PLIP) MG.225: 1 residues within 4Å: Chain l: A.20 No protein-ligand interaction detected (PLIP)

5 x ZN: ZINC ION(Non-covalent)

ZN.5: 5 residues within 4Å: Chain 5: S.44, C.46, C.49, C.83, C.86 4 PLIP interactions: 4 interactions with chain 5 Metal complexes: 5:S.44, 5:C.46, 5:C.49, 5:C.83 ZN.7: 4 residues within 4Å: Chain 8: C.19, C.22, C.34, C.37 4 PLIP interactions: 4 interactions with chain 8 Metal complexes: 8:C.19, 8:C.22, 8:C.34, 8:C.37 ZN.9: 5 residues within 4Å: Chain b: C.70, C.73, C.84, C.89, T.92 4 PLIP interactions: 4 interactions with chain b Metal complexes: b:C.70, b:C.73, b:C.84, b:C.89 ZN.10: 5 residues within 4Å: Chain d: C.12, C.15, Q.19, C.72, C.77 4 PLIP interactions: 4 interactions with chain d Metal complexes: d:C.12, d:C.15, d:C.72, d:C.77 ZN.11: 5 residues within 4Å: Chain e: C.39, C.42, C.57, S.59, C.60 3 PLIP interactions: 3 interactions with chain e Metal complexes: e:C.39, e:C.42, e:C.57

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lin, Z. et al., TTC5 mediates autoregulation of tubulin via mRNA degradation. Science (2020)

Release Date

2019-11-27

Peptides

Ribosomal protein L8: A
uL3: B
uL4: C
60S ribosomal protein L5: D
60S ribosomal protein L6: E
Ul30: F
eL8: G
uL6: H
60S ribosomal protein L10: I
Ribosomal protein L11: J
eL13: K
Ribosomal protein L14: L
Ribosomal protein L15: M
uL13: N
uL22: O
eL18: P
eL19: Q
eL20: R
eL21: S
eL22: T
Ribosomal protein L23: U
eL24: V
uL23: W
Ribosomal protein L26: X
60S ribosomal protein L27: Y
uL15: Z
eL29: 0
eL30: 1
eL31: 2
eL32: 3
eL33: 4
eL34: 5
uL29: 6
60S ribosomal protein L36: 7
Ribosomal protein L37: 8
eL38: 9
eL39: a
eL40: b
60s ribosomal protein l41: c
eL42: d
eL43: e
eL28: f
uL10: g
Ribosomal protein L12: h
Nascent polypeptide-associated complex subunit alpha N-terminal region: m
Nascent polypeptide-associated complex subunit alpha: n
Transcription factor BTF3: o
Tetratricopeptide repeat protein 5: p
Tubulin Beta: q

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A3

B
B3

C
C3

D
D3

E
E3

F
F3

G
G3

H
H3

I
I3

J
J3

K
L3

L
M3

M
N3

N
O3

O
P3

P
Q3

Q
R3

R
S3

S
T3

T
U3

U
V3

V
W3

W
X3

X
Y3

Y
Z3

Z
a3

0
b3

1
c3

2
d3

3
e3

4
f3

5
g3

6
h3

7
i3

8
j3

9
k3

a
l3

b
m3

c
n3

d
o3

e
p3

f
r3

g
s3

h
t3

m
NI

n
NA

o
NB

p
TT

q
1

Ribosomal protein L8

uL3

uL4

60S ribosomal protein L5

60S ribosomal protein L6

Ul30

eL8

uL6

60S ribosomal protein L10

Ribosomal protein L11

eL13

Ribosomal protein L14

Ribosomal protein L15

uL13

uL22

eL18

eL19

eL20

eL21

eL22

Ribosomal protein L23

eL24

uL23

Ribosomal protein L26

60S ribosomal protein L27

uL15

eL29

eL30

eL31

eL32

eL33

eL34

uL29

60S ribosomal protein L36

Ribosomal protein L37

eL38

eL39

eL40

60s ribosomal protein l41

eL42

eL43

eL28

uL10

Ribosomal protein L12

Nascent polypeptide-associated complex subunit alpha N-terminal region

Nascent polypeptide-associated complex subunit alpha

Transcription factor BTF3

Tetratricopeptide repeat protein 5

Tubulin Beta

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