SMTL ID : 7syj.1

Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 4(delta dII)

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
2 x ZN: ZINC ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Brown, Z.P. et al., Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES. Embo J. (2022)
Release Date
2022-07-13
Peptides
40S ribosomal protein SA: B
eS1: C
uS5 (S2): D
uS3: E
40S ribosomal protein S4: F
uS7: G
eS6: H
40S ribosomal protein S7: I
eS8: J
uS4: K
eS10: L
uS17: M
eS12: N
uS15: O
uS11: P
uS19: Q
uS9: R
eS17: S
uS13: T
eS19: U
uS10: V
40S ribosomal protein S21: W
uS8: X
uS12: Y
40S ribosomal protein S24: Z
eS25 (S25): 0
eS26 (S26): 1
eS28: 2
eS29: 3
eS30: 4
40S ribosomal protein S27a: 5
RACK1: 6
60s ribosomal protein l41: 7
eS27: 9
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
B
B
C
C
D
D
E
E
F
F
G
G
H
H
I
I
J
J
K
K
L
L
M
M
N
N
O
O
P
P
Q
Q
R
R
S
S
T
T
U
U
V
V
W
W
X
X
Y
Y
Z
Z
0
a
1
b
2
d
3
e
4
f
5
g
6
h
7
n
9
c

40S ribosomal protein SA

eS1

uS5 (S2)

uS3

40S ribosomal protein S4

uS7

eS6

40S ribosomal protein S7

eS8

uS4

eS10

uS17

eS12

uS15

uS11

uS19

uS9

eS17

uS13

eS19

uS10

40S ribosomal protein S21

uS8

uS12

40S ribosomal protein S24

eS25 (S25)

eS26 (S26)

eS28

eS29

eS30

40S ribosomal protein S27a

RACK1

60s ribosomal protein l41

eS27

Related Entries With Identical Sequence

3j7o.1 | 3j7p.40 | 3j7p.50 | 3j7p.51 | 3j7p.52 | 3j7p.54 | 3j7p.55 | 3j7p.57 | 3j7p.59 | 3j7p.63 | 3j7p.64 | 3j7p.67 | 3j7p.68 | 3j7p.73 | 3j7p.74 | 3j7p.78 | 3j7q.1 | 3j7r.39 | 3j7r.51 | 3j7r.52 | 3j7r.53 | 3j7r.55 | 3j7r.56 | 3j7r.58 | 3j7r.60 | 3j7r.64 | 3j7r.65 | 3j7r.68 | 3j7r.69 | 3j7r.74  more...