- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.39 Å
- Oligo State
- homo-hexamer
- Ligands
- 7 x CD: CADMIUM ION(Non-covalent)
- 6 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.3: 5 residues within 4Å:- Chain A: C.176, S.180, R.212, R.214, R.259
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:S.180
- Salt bridges: A:R.212, A:R.214, A:R.259
PO4.8: 5 residues within 4Å:- Chain B: C.176, S.180, R.212, R.214, R.259
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:S.180, B:S.180
- Salt bridges: B:R.212, B:R.214, B:R.259
PO4.11: 4 residues within 4Å:- Chain C: S.180, R.212, R.214, R.259
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:S.180, C:R.181
- Salt bridges: C:R.212, C:R.214, C:R.259
PO4.15: 5 residues within 4Å:- Chain D: S.180, R.181, R.212, R.214, R.259
5 PLIP interactions:5 interactions with chain D- Hydrogen bonds: D:S.180, D:S.180
- Salt bridges: D:R.212, D:R.214, D:R.259
PO4.17: 6 residues within 4Å:- Chain E: C.176, S.180, R.181, R.212, R.214, R.259
5 PLIP interactions:5 interactions with chain E- Hydrogen bonds: E:S.180, E:R.181
- Salt bridges: E:R.212, E:R.214, E:R.259
PO4.19: 5 residues within 4Å:- Chain F: C.176, S.180, R.212, R.214, R.259
5 PLIP interactions:5 interactions with chain F- Hydrogen bonds: F:S.180, F:S.180
- Salt bridges: F:R.212, F:R.214, F:R.259
- 7 x SO4: SULFATE ION(Non-functional Binders)
SO4.4: 4 residues within 4Å:- Chain A: K.90, T.189, H.190
- Ligands: CD.2
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:H.190
- Water bridges: A:K.90, A:K.90, A:D.191
- Salt bridges: A:K.90, A:H.190
SO4.5: 6 residues within 4Å:- Chain A: S.26, G.28, I.29, D.30, S.31, G.123
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:S.26, A:G.28, A:D.30, A:S.31
SO4.9: 5 residues within 4Å:- Chain B: S.26, G.28, D.30, S.31, G.123
7 PLIP interactions:7 interactions with chain B- Hydrogen bonds: B:S.26, B:G.28, B:G.28, B:D.30, B:D.30, B:S.31, B:G.123
SO4.12: 4 residues within 4Å:- Chain C: S.26, G.28, D.30, S.31
6 PLIP interactions:6 interactions with chain C- Hydrogen bonds: C:S.26, C:S.26, C:G.28, C:D.30, C:D.30, C:S.31
SO4.16: 6 residues within 4Å:- Chain D: S.26, G.28, I.29, D.30, S.31, G.123
7 PLIP interactions:7 interactions with chain D- Hydrogen bonds: D:S.26, D:S.26, D:G.28, D:D.30, D:D.30, D:S.31, D:G.123
SO4.18: 6 residues within 4Å:- Chain E: S.26, G.28, I.29, D.30, S.31, G.123
6 PLIP interactions:6 interactions with chain E- Hydrogen bonds: E:S.26, E:G.28, E:D.30, E:D.30, E:S.31, E:S.31
SO4.20: 5 residues within 4Å:- Chain F: S.26, G.28, D.30, S.31, G.123
5 PLIP interactions:5 interactions with chain F- Hydrogen bonds: F:S.26, F:G.28, F:D.30, F:S.31, F:S.31
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Fellner, M. et al., Crystallographic characterization of a tri-Asp metal-binding site at the three-fold symmetry axis of LarE. Sci Rep (2020)
- Release Date
- 2019-11-06
- Peptides
- ATP-dependent sacrificial sulfur transferase LarE: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.39 Å
- Oligo State
- homo-hexamer
- Ligands
- 7 x CD: CADMIUM ION(Non-covalent)
- 6 x PO4: PHOSPHATE ION(Non-functional Binders)
- 7 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Fellner, M. et al., Crystallographic characterization of a tri-Asp metal-binding site at the three-fold symmetry axis of LarE. Sci Rep (2020)
- Release Date
- 2019-11-06
- Peptides
- ATP-dependent sacrificial sulfur transferase LarE: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
F