SMTL ID : 6v0s.1

Crystal structure of the bromodomain of human BRD9 bound to TG003

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x EAE: (1~{Z})-1-(3-ethyl-5-methoxy-1,3-benzothiazol-2-ylidene)propan-2-one(Non-covalent)

EAE.1: 8 residues within 4Å: Chain A: F.33, F.34, F.36, V.38, I.42, A.85, N.89, Y.95 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.34, A:F.36, A:A.85 Hydrogen bonds: A:N.89 EAE.2: 8 residues within 4Å: Chain B: F.33, F.34, V.38, I.42, A.43, A.85, N.89, Y.95 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:F.34, B:V.38, B:I.42, B:A.43, B:A.85 Hydrogen bonds: B:N.89, B:Y.95 pi-Stacking: B:Y.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Karim, R.M. et al., Structural Basis of Inhibitor Selectivity in the BRD7/9 Subfamily of Bromodomains. J.Med.Chem. (2020)

Release Date

2020-03-11

Peptides

Bromodomain-containing protein 9: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Bromodomain-containing protein 9

Related Entries With Identical Sequence