SMTL ID : 6vwg.1

Head region of the open conformation of the human type 1 insulin-like growth factor receptor ectodomain in complex with human insulin-like growth factor II.

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-1-mer

Ligands

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: K.17, R.18, E.20, N.21 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.21 NAG.2: 2 residues within 4Å: Chain A: Q.383, N.387 No protein-ligand interaction detected (PLIP) NAG.3: 10 residues within 4Å: Chain A: N.105, I.106, T.107, S.128, L.129, I.130, L.131, D.132, L.206, R.222 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.105 NAG.4: 6 residues within 4Å: Chain B: K.373, H.406, F.502, N.504, V.505, D.509 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, Y. et al., How IGF-II Binds to the Human Type 1 Insulin-like Growth Factor Receptor. Structure (2020)

Release Date

2020-05-13

Peptides

Leucine-zippered human type 1 insulin-like growth factor receptor ectodomain: AB
Insulin-like growth factor II: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
I

Leucine-zippered human type 1 insulin-like growth factor receptor ectodomain

Insulin-like growth factor II

Related Entries With Identical Sequence