SMTL ID : 6vwi.1

Head region of the closed conformation of the human type 1 insulin-like growth factor receptor ectodomain in complex with human insulin-like growth factor II.

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-1-mer

Ligands

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: K.17, R.18, E.20, N.21 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:E.20 Hydrogen bonds: A:E.20, A:N.21 NAG.2: 2 residues within 4Å: Chain A: Q.383, N.387 No protein-ligand interaction detected (PLIP) NAG.3: 10 residues within 4Å: Chain A: R.104, N.105, I.106, T.107, L.129, I.130, L.131, D.132, L.206, R.222 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.105, A:D.132, A:D.132 NAG.4: 3 residues within 4Å: Chain B: K.373, F.502, N.504 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, Y. et al., How IGF-II Binds to the Human Type 1 Insulin-like Growth Factor Receptor. Structure (2020)

Release Date

2020-05-13

Peptides

Leucine-zippered human type 1 insulin-like growth factor receptor ectodomain: AB
Insulin-like growth factor II: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
I

Leucine-zippered human type 1 insulin-like growth factor receptor ectodomain

Insulin-like growth factor II

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