SMTL ID : 6ypg.1

Crystal Structure of CK2alpha with Compound 2 bound to second crystal form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.51 Å

Oligo State

monomer

Ligands

1 x N5Q: 4-[(4-naphthalen-2-yl-1,3-thiazol-2-yl)amino]-2-oxidanyl-benzoic acid(Non-covalent)

N5Q.1: 12 residues within 4Å: Chain A: L.44, G.45, R.46, V.52, V.65, K.67, F.112, N.117, H.159, M.162, I.173, D.174 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.44, A:V.65, A:F.112, A:I.173, A:I.173 Hydrogen bonds: A:D.174 Water bridges: A:K.67, A:E.80 Salt bridges: A:K.67 pi-Stacking: A:H.159, A:H.159

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 6 residues within 4Å: Chain A: Q.35, Y.38, V.66, D.102, P.103, A.109 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Y.38 Hydrogen bonds: A:Q.35, A:D.102

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Brear, P. et al., Proposed Allosteric Inhibitors Bind to the ATP Site of CK2 alpha. J.Med.Chem. (2020)

Release Date

2020-07-15

Peptides

Casein kinase II subunit alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Casein kinase II subunit alpha

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