SMTL ID : 6zka.1

Membrane domain of open complex I during turnover

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
5 x PC1: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
1 x DCQ: 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione
12 x 3PE: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE
7 x CDL: CARDIOLIPIN
1 x ZMP: S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate
1 x AMP: ADENOSINE MONOPHOSPHATE
1 x MYR: MYRISTIC ACID
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Kampjut, D. et al., The coupling mechanism of mammalian respiratory complex I. Science (2020)
Release Date
2020-10-07
Peptides
NADH-ubiquinone oxidoreductase chain 3: A
NADH-ubiquinone oxidoreductase chain 1: B
NADH-ubiquinone oxidoreductase chain 6: C
NADH-ubiquinone oxidoreductase chain 4L: D
NADH-ubiquinone oxidoreductase chain 5: E
NADH-ubiquinone oxidoreductase chain 4: F
NADH-ubiquinone oxidoreductase chain 2: G
Mitochondrial complex I, B14.7 subunit: H
NADH:ubiquinone oxidoreductase subunit B5: I
Acyl carrier protein: J
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8: K
Mitochondrial complex I, PDSW subunit: L
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial: M
NADH:ubiquinone oxidoreductase subunit S5: N
NADH:ubiquinone oxidoreductase subunit A3: O
NADH:ubiquinone oxidoreductase subunit B3: P
NADH dehydrogenase [ubiquinone] 1 subunit C2: Q
NADH:ubiquinone oxidoreductase subunit B4: R
Mitochondrial complex I, B16.6 subunit: S
Mitochondrial complex I, B17 subunit: T
NADH:ubiquinone oxidoreductase subunit B7: U
NADH:ubiquinone oxidoreductase subunit B9: V
NADH:ubiquinone oxidoreductase subunit B2: W
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial: X
Mitochondrial complex I, ESSS subunit: Y
Mitochondrial complex I, KFYI subunit: Z
Mitochondrial complex I, MNLL subunit: 0
Mitochondrial complex I, MWFE subunit: 1
Mitochondrial complex I, ND4L subunit: 2
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
H
C
J
D
K
E
L
F
M
G
N
H
V
I
W
J
X
K
Y
L
Z
M
k
N
l
O
m
P
n
Q
o
R
p
S
q
T
r
U
s
V
t
W
u
X
v
Y
w
Z
x
0
y
1
z
2
4
Membrane
We predict this structure to be a membrane protein.

NADH-ubiquinone oxidoreductase chain 3

NADH-ubiquinone oxidoreductase chain 1

NADH-ubiquinone oxidoreductase chain 6

NADH-ubiquinone oxidoreductase chain 4L

NADH-ubiquinone oxidoreductase chain 5

NADH-ubiquinone oxidoreductase chain 4

NADH-ubiquinone oxidoreductase chain 2

Mitochondrial complex I, B14.7 subunit

NADH:ubiquinone oxidoreductase subunit B5

Acyl carrier protein

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8

Mitochondrial complex I, PDSW subunit

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial

NADH:ubiquinone oxidoreductase subunit S5

NADH:ubiquinone oxidoreductase subunit A3

NADH:ubiquinone oxidoreductase subunit B3

NADH dehydrogenase [ubiquinone] 1 subunit C2

NADH:ubiquinone oxidoreductase subunit B4

Mitochondrial complex I, B16.6 subunit

Mitochondrial complex I, B17 subunit

NADH:ubiquinone oxidoreductase subunit B7

NADH:ubiquinone oxidoreductase subunit B9