- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-2-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 6 x SF4: IRON/SULFUR CLUSTER
SF4.1: 12 residues within 4Å:- Chain A: I.205, P.223, S.378, C.379, G.380, Q.381, C.382, C.385, T.423, I.424, C.425, L.427
3 PLIP interactions:3 interactions with chain A,- Metal complexes: A:C.379, A:C.385, A:C.425
SF4.5: 13 residues within 4Å:- Chain C: H.124, P.125, D.127, C.128, C.131, Q.133, G.134, C.137, L.139, Q.140, V.228, G.229
- Chain D: M.375
5 PLIP interactions:5 interactions with chain C,- Salt bridges: C:D.127
- Metal complexes: C:H.124, C:C.128, C:C.131, C:C.137
SF4.6: 13 residues within 4Å:- Chain C: M.173, C.176, I.177, Q.178, C.179, T.180, R.181, C.182, V.206, C.226, V.228, A.230, L.231
4 PLIP interactions:4 interactions with chain C,- Metal complexes: C:C.176, C:C.179, C:C.182, C:C.226
SF4.10: 15 residues within 4Å:- Chain D: R.118, R.138, H.223
- Chain F: A.97, C.98, C.99, G.134, T.135, G.161, S.162, C.163, Y.170, G.192, C.193, P.194
3 PLIP interactions:3 interactions with chain F,- Metal complexes: F:C.98, F:C.163, F:C.193
SF4.13: 12 residues within 4Å:- Chain G: H.106, C.128, P.129, I.133, C.157, I.158, Y.159, C.160, G.161, F.162, C.163, E.174
4 PLIP interactions:4 interactions with chain G,- Salt bridges: G:E.174
- Metal complexes: G:C.128, G:C.157, G:C.163
SF4.14: 14 residues within 4Å:- Chain G: C.118, I.119, A.120, C.121, K.122, L.123, C.124, I.135, Y.150, C.167, P.168, V.169, A.171, I.172
4 PLIP interactions:4 interactions with chain G,- Metal complexes: G:C.118, G:C.121, G:C.124, G:C.167
- 1 x FMN: FLAVIN MONONUCLEOTIDE
FMN.2: 19 residues within 4Å:- Chain A: G.87, R.88, G.89, G.90, K.98, N.116, D.118, E.119, G.120, G.207, E.208, E.209, V.242, A.243, N.244, T.247, A.426, L.427
- Ligands: NAI.3
14 PLIP interactions:14 interactions with chain A- Hydrophobic interactions: A:E.208, A:E.208, A:A.426, A:L.427
- Hydrogen bonds: A:R.88, A:G.89, A:G.90, A:N.116, A:E.119, A:G.120, A:G.207, A:E.209, A:N.244
- Salt bridges: A:K.98
- 1 x NAI: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
NAI.3: 17 residues within 4Å:- Chain A: G.89, G.90, A.91, F.93, K.98, F.101, E.119, G.120, E.121, Y.204, E.209, F.229, S.323, G.350, T.351, A.426
- Ligands: FMN.2
12 PLIP interactions:12 interactions with chain A- Hydrophobic interactions: A:E.121, A:Y.204, A:T.351
- Hydrogen bonds: A:G.89, A:K.98, A:G.120, A:E.121, A:E.209, A:S.323
- Salt bridges: A:K.226
- pi-Stacking: A:F.93, A:F.229
- 2 x FES: FE2/S2 (INORGANIC) CLUSTER
FES.4: 9 residues within 4Å:- Chain B: C.132, T.134, P.136, C.137, C.173, L.174, G.175, A.176, C.177
4 PLIP interactions:4 interactions with chain B,- Metal complexes: B:C.132, B:C.137, B:C.173, B:C.177
FES.7: 9 residues within 4Å:- Chain C: R.62, C.64, Y.65, G.73, N.74, C.75, R.76, C.78, C.92
4 PLIP interactions:4 interactions with chain C,- Metal complexes: C:C.64, C:C.75, C:C.78, C:C.92
- 1 x K: POTASSIUM ION
K.8: 5 residues within 4Å:- Chain C: Q.133, I.223, C.226, V.228, L.231
4 PLIP interactions:4 interactions with chain C- Metal complexes: C:I.223, C:C.226, C:V.228, C:L.231
- 14 x 3PE: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE
3PE.9: 20 residues within 4Å:- Chain D: W.43, Q.46, Y.47, M.52, Y.53
- Chain L: L.562, P.563, S.567, Q.570, M.571
- Chain M: N.144, Y.148, F.151, Y.152
- Chain N: I.284, L.287, L.288, Y.291
- Ligands: PC1.26, CDL.33
17 PLIP interactions:5 interactions with chain M, 5 interactions with chain N, 4 interactions with chain L, 3 interactions with chain D- Hydrophobic interactions: M:Y.148, M:F.151, M:Y.152, M:Y.152, N:L.287, N:L.288, N:Y.291, N:Y.291, N:Y.291, L:L.562, L:L.562, L:P.563
- Hydrogen bonds: M:N.144, D:Q.46, D:Y.53, D:Y.53
- Salt bridges: L:K.564
3PE.16: 16 residues within 4Å:- Chain 5: V.12, E.16, L.19, V.20, S.22, F.23, A.24, A.26, G.27
- Chain H: F.96, A.99, L.102, A.103, W.106
- Chain I: P.295, M.302
12 PLIP interactions:7 interactions with chain 5, 1 interactions with chain I, 4 interactions with chain H- Hydrophobic interactions: 5:V.12, 5:F.23, 5:F.23, 5:F.23, 5:F.23, 5:F.23, 5:A.26, I:P.295, H:F.96, H:A.99, H:L.102, H:A.103
3PE.18: 25 residues within 4Å:- Chain 9: F.140, I.141, W.142, T.144
- Chain H: L.3, M.4, L.7, F.11
- Chain I: L.77, L.81, M.98, N.99, F.104, M.108
- Chain J: L.31, I.34, V.35, G.38, G.42, L.45, N.46, S.50, L.54, F.57
- Chain i: H.40
17 PLIP interactions:7 interactions with chain J, 6 interactions with chain I, 1 interactions with chain i, 3 interactions with chain H- Hydrophobic interactions: J:L.31, J:I.34, J:V.35, J:L.54, J:F.57, J:F.57, I:L.77, I:L.81, I:F.104, I:F.104, H:L.7, H:L.7, H:F.11
- Hydrogen bonds: J:S.50, I:N.99, I:L.100, i:H.40
3PE.19: 15 residues within 4Å:- Chain J: S.21, K.23, V.88, T.92, T.95, G.96
- Chain K: V.14, T.17, M.21, Y.22, R.23
- Chain L: K.585, L.592, L.596
- Ligands: 3PE.30
10 PLIP interactions:3 interactions with chain L, 4 interactions with chain J, 3 interactions with chain K- Hydrophobic interactions: L:L.592, L:L.596, J:T.92, J:T.92, J:T.95, K:V.14, K:V.14, K:M.21
- Salt bridges: L:K.585, J:K.23
3PE.20: 23 residues within 4Å:- Chain L: D.163, T.166, Q.170, L.173, Y.174, I.177, I.217, L.218, T.221, F.227, G.228, L.229, L.280, Y.529, M.533, H.534, T.537, P.538, N.541
- Chain M: L.405
- Chain e: N.115, R.116, V.117
13 PLIP interactions:12 interactions with chain L, 1 interactions with chain e- Hydrophobic interactions: L:L.173, L:Y.174, L:I.177, L:I.217, L:T.221, L:L.229, L:L.280, L:T.537, L:P.538, L:N.541, e:R.116
- Salt bridges: L:H.534, L:H.534
3PE.23: 6 residues within 4Å:- Chain 6: V.64
- Chain L: M.383, T.494, I.495, F.498, I.499
6 PLIP interactions:6 interactions with chain L- Hydrophobic interactions: L:T.494, L:I.495, L:I.495, L:F.498, L:F.498, L:F.498
3PE.24: 16 residues within 4Å:- Chain L: L.558, I.561, L.562
- Chain M: N.188, W.190, F.194, Y.210, G.211, F.256, M.257, P.260, F.261, L.264
- Chain O: L.88, M.127
- Ligands: CDL.33
13 PLIP interactions:8 interactions with chain M, 3 interactions with chain L, 2 interactions with chain O- Hydrophobic interactions: M:W.190, M:F.194, M:F.194, M:P.260, M:F.261, M:F.261, M:L.264, L:L.558, L:I.561, L:L.562, O:L.88, O:L.88
- Hydrogen bonds: M:N.188
3PE.28: 18 residues within 4Å:- Chain 4: P.2
- Chain N: K.46, S.125, L.128, I.129, T.132, W.133, L.136, I.206, I.209, I.210, S.213, T.217, M.220, R.322, T.324, L.325, M.329
11 PLIP interactions:10 interactions with chain N, 1 interactions with chain 4- Hydrophobic interactions: N:L.128, N:I.129, N:W.133, N:I.206, N:I.209, N:I.210, N:T.217, N:L.325, 4:P.2
- Hydrogen bonds: N:S.125
- Salt bridges: N:K.46
3PE.29: 11 residues within 4Å:- Chain 4: P.2
- Chain 7: Q.8, P.12, L.13, F.15, R.80
- Chain N: Y.143, I.206, I.345, L.346
- Ligands: CDL.44
9 PLIP interactions:2 interactions with chain N, 6 interactions with chain 7, 1 interactions with chain 4- Hydrophobic interactions: N:I.206, N:L.346, 7:F.15
- Hydrogen bonds: 7:Q.8, 7:L.13, 7:F.15, 7:R.80, 4:F.3
- Salt bridges: 7:R.80
3PE.30: 12 residues within 4Å:- Chain L: L.589, I.593
- Chain O: L.34, A.38, V.41, P.46, S.48, F.49, G.52, V.53, T.56
- Ligands: 3PE.19
9 PLIP interactions:7 interactions with chain O, 2 interactions with chain L- Hydrophobic interactions: O:L.34, O:A.38, O:V.41, O:F.49, O:V.53, O:T.56, L:L.589, L:I.593
- Hydrogen bonds: O:F.49
3PE.31: 11 residues within 4Å:- Chain N: I.277
- Chain O: L.6, W.10, L.124, V.125, G.128, Q.129, W.133, K.134
- Ligands: PC1.26, CDL.32
5 PLIP interactions:1 interactions with chain N, 4 interactions with chain O- Hydrophobic interactions: N:I.277, O:L.6, O:L.124
- Salt bridges: O:K.134, O:K.134
3PE.34: 13 residues within 4Å:- Chain 8: P.83, N.84, T.85, S.88, L.89, G.91, A.92
- Chain L: W.557, L.558
- Chain O: Y.108, G.109, A.112
- Ligands: CDL.33
7 PLIP interactions:2 interactions with chain 8, 4 interactions with chain L, 1 interactions with chain O- Hydrogen bonds: 8:P.83, 8:T.85
- Hydrophobic interactions: L:W.557, L:W.557, L:W.557, L:L.558, O:A.112
3PE.41: 15 residues within 4Å:- Chain 1: R.29, W.75, V.77
- Chain F: Y.72, V.73, D.79, L.80, W.83, R.86, K.212
- Chain I: L.46, I.49, I.53
- Ligands: PC1.11, 3PE.42
14 PLIP interactions:10 interactions with chain F, 3 interactions with chain I, 1 interactions with chain 1- Hydrophobic interactions: F:Y.72, F:V.73, F:D.79, F:W.83, F:W.83, F:W.83, I:L.46, I:I.49, I:I.53
- Salt bridges: F:R.86, F:R.86, F:K.212, F:K.212
- Hydrogen bonds: 1:R.29
3PE.42: 7 residues within 4Å:- Chain 1: F.28, F.74, W.75
- Chain I: F.19, P.42, L.46
- Ligands: 3PE.41
3 PLIP interactions:3 interactions with chain I- Hydrophobic interactions: I:F.19, I:P.42, I:L.46
- 6 x PC1: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
PC1.11: 14 residues within 4Å:- Chain F: L.77, I.81, L.217, W.220, R.223
- Chain H: L.24, L.27, N.28, V.29, Y.30
- Chain I: I.53, F.56
- Chain W: D.90
- Ligands: 3PE.41
11 PLIP interactions:6 interactions with chain F, 3 interactions with chain I, 1 interactions with chain H, 1 interactions with chain W- Hydrophobic interactions: F:L.77, F:I.81, F:I.81, F:W.220, F:W.220, I:I.53, I:F.56, I:F.56, H:L.24
- Salt bridges: F:R.223, W:D.90
PC1.12: 26 residues within 4Å:- Chain 5: K.15, E.16, I.25, L.28
- Chain 9: F.36, I.40
- Chain D: R.266
- Chain G: T.65, L.66, W.68, L.71, L.75
- Chain I: W.179, P.180, M.183, M.184, F.186, I.187, P.197, Y.277, F.280, H.287, L.288, N.292, F.293, L.296
21 PLIP interactions:11 interactions with chain I, 3 interactions with chain 5, 3 interactions with chain G, 2 interactions with chain D, 2 interactions with chain 9- Hydrophobic interactions: I:W.179, I:P.180, I:P.180, I:M.183, I:F.186, I:F.186, I:P.197, I:F.280, I:L.288, I:F.293, I:L.296, 5:I.25, 5:L.28, G:W.68, G:L.71, G:L.75, 9:F.36, 9:I.40
- Salt bridges: 5:E.16, D:R.266, D:R.266
PC1.15: 7 residues within 4Å:- Chain 4: L.14
- Chain H: N.83, T.86
- Chain J: Y.149, T.151, W.152, I.155
6 PLIP interactions:1 interactions with chain 4, 3 interactions with chain H, 2 interactions with chain J- Hydrophobic interactions: 4:L.14, J:W.152, J:I.155
- Hydrogen bonds: H:N.83, H:N.83, H:T.86
PC1.21: 19 residues within 4Å:- Chain L: W.66, H.67, W.68, L.76, S.77, L.78, F.138, I.142
- Chain M: P.371, L.449
- Ligands: CDL.22, PC1.25, CDL.35
- Chain a: I.81, Y.84, Y.85, H.89, K.93
- Chain f: E.116
25 PLIP interactions:9 interactions with chain a, 1 interactions with chain f, 13 interactions with chain L, 2 interactions with chain M- Hydrophobic interactions: a:I.81, a:Y.84, a:Y.84, a:Y.85, a:Y.85, a:H.89, L:W.66, L:W.66, L:W.66, L:W.68, L:W.68, L:W.68, L:W.68, L:L.76, L:L.78, L:F.138, L:F.138, L:I.142, M:P.371, M:P.371
- Salt bridges: a:H.89, a:K.93, a:K.93, f:E.116
- Hydrogen bonds: L:H.67
PC1.25: 22 residues within 4Å:- Chain L: T.16, W.66, L.123
- Chain M: P.64, I.67, L.68, W.71, L.446, L.447, L.449, N.450, I.454
- Ligands: PC1.21, CDL.22, CDL.35
- Chain f: V.98, L.99, G.102, S.103, V.106, A.107, Y.108
12 PLIP interactions:9 interactions with chain M, 2 interactions with chain L, 1 interactions with chain f- Hydrophobic interactions: M:P.64, M:L.68, M:W.71, M:W.71, M:L.446, M:L.447, M:L.447, M:L.449, M:I.454, L:T.16, L:L.123, f:V.98
PC1.26: 25 residues within 4Å:- Chain L: I.566
- Chain M: Y.152, A.155, G.156, P.159, Y.166, S.191, F.194, M.195, L.197, A.198, M.201, V.205
- Chain N: D.274, I.276, I.277, T.280, L.281, I.284
- Chain O: L.124, E.131, W.133
- Ligands: 3PE.9, 3PE.31, CDL.33
20 PLIP interactions:8 interactions with chain M, 6 interactions with chain N, 5 interactions with chain O, 1 interactions with chain L- Hydrophobic interactions: M:P.159, M:P.159, M:F.194, M:L.197, M:L.197, M:A.198, M:M.201, M:V.205, N:I.276, N:I.277, N:T.280, N:L.281, N:I.284, O:L.124, O:L.124, O:W.133, O:W.133, O:W.133, L:I.566
- Hydrogen bonds: N:D.274
- 1 x DCQ: 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione
DCQ.17: 11 residues within 4Å:- Chain F: W.90
- Chain I: T.21, R.25, D.51, A.52, L.55, F.56, F.220, A.221, F.224, M.225
9 PLIP interactions:9 interactions with chain I- Hydrophobic interactions: I:T.21, I:A.52, I:L.55, I:F.56, I:F.56, I:A.221, I:F.224
- Hydrogen bonds: I:D.51
- pi-Stacking: I:F.224
- 8 x CDL: CARDIOLIPIN
CDL.22: 38 residues within 4Å:- Chain L: I.22, N.23, F.24, L.78, Q.116, K.119, Y.120, L.123, T.127, I.130, Q.139, I.142, M.150, L.153
- Chain M: P.353, L.354, A.357, W.358, L.360, L.361, L.364, L.369, P.370, P.371, S.372, L.442, L.445, L.446, S.448, L.449
- Chain P: L.68, R.72, I.75
- Ligands: PC1.21, PC1.25, CDL.35
- Chain f: L.99, S.103
21 PLIP interactions:11 interactions with chain L, 2 interactions with chain P, 6 interactions with chain M, 2 interactions with chain f- Hydrophobic interactions: L:F.24, L:L.78, L:T.127, L:I.130, L:Q.139, L:I.142, L:I.142, P:R.72, P:I.75, M:W.358, M:L.361, M:L.361, M:L.442, M:L.442, M:L.446, f:L.99, f:L.99
- Hydrogen bonds: L:Q.116, L:Y.120
- Salt bridges: L:K.119, L:K.119
CDL.27: 33 residues within 4Å:- Chain 3: F.328, Q.329, K.338, Y.339
- Chain 7: A.34, G.37, F.38, Y.41, L.45, I.46, A.49, V.55, L.56
- Chain M: W.16, L.17, N.88, A.90, R.91, L.94, M.98, L.101, V.127, I.131, R.135
- Chain N: P.238, I.239, T.241, I.242, L.245, I.246, L.249, L.257, M.335
28 PLIP interactions:5 interactions with chain 3, 5 interactions with chain N, 8 interactions with chain 7, 10 interactions with chain M- Hydrogen bonds: 3:Q.329, 3:K.338, 3:K.338,
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-2-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 6 x SF4: IRON/SULFUR CLUSTER
- 1 x FMN: FLAVIN MONONUCLEOTIDE
- 1 x NAI: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
- 2 x FES: FE2/S2 (INORGANIC) CLUSTER
- 1 x K: POTASSIUM ION
- 14 x 3PE: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE
- 6 x PC1: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
- 1 x DCQ: 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione
- 8 x CDL: CARDIOLIPIN