SMTL ID : 6zs5.1

3.5 A cryo-EM structure of human uromodulin filament core

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

1 x NAG- NAG- BMA- MAN- MAN: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-MAN.1: 6 residues within 4Å: Chain A: N.396, T.398, H.399, T.401, S.426 Chain B: R.449 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:R.449, A:S.426

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.2: 2 residues within 4Å: Chain B: N.513, T.515 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stanisich, J.J. et al., The cryo-EM structure of the human uromodulin filament core reveals a unique assembly mechanism. Elife (2020)

Release Date

2020-09-02

Peptides

Uromodulin: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

Uromodulin

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