SMTL ID : 7arm.1

LolCDE in complex with lipoprotein and LolA

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-2-1-1-mer

Ligands

1 x Z41: (2S)-3-hydroxypropane-1,2-diyl dihexadecanoate(Covalent)

Z41.1: 15 residues within 4Å: Chain A: T.43, V.47, M.48, F.51, E.263, M.266, M.267, L.270, L.273 Chain B: L.36, D.264, I.271 Chain E: C.1, S.2 Ligands: PLM.2 7 PLIP interactions: 2 interactions with chain B, 4 interactions with chain A, 1 interactions with chain E Hydrophobic interactions: B:L.36, B:I.271, A:V.47, A:F.51, A:L.270, A:L.273 Hydrogen bonds: E:S.2

1 x PLM: PALMITIC ACID(Covalent)

PLM.2: 8 residues within 4Å: Chain B: V.43, M.48, F.51, D.264, Y.366, F.367 Chain E: C.1 Ligands: Z41.1 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:F.51, B:Y.366, B:F.367

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tang, X. et al., Structural basis for bacterial lipoprotein relocation by the transporter LolCDE. Nat.Struct.Mol.Biol. (2021)

Release Date

2021-04-07

Peptides

Lipoprotein-releasing ABC transporter permease subunit LolC: A
Lipoprotein-releasing system transmembrane protein LolE: B
Lipoprotein-releasing system ATP-binding protein LolD: CD
LPP: E
Outer-membrane lipoprotein carrier protein: F

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
E

C
F

D
D

E
V

F
A

Membrane

We predict this structure to be a membrane protein.
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Lipoprotein-releasing ABC transporter permease subunit LolC

Lipoprotein-releasing system transmembrane protein LolE

Lipoprotein-releasing system ATP-binding protein LolD

LPP

Outer-membrane lipoprotein carrier protein

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