- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 32 x XE: XENON(Non-functional Binders)(Non-covalent)
XE.2: 0 residues within 4Å:- (No contacts)
Ligand excluded by PLIPXE.3: 5 residues within 4Å:- Chain A: V.581, M.582, L.591, T.592, I.603
Ligand excluded by PLIPXE.4: 3 residues within 4Å:- Chain A: V.203, T.207, L.595
Ligand excluded by PLIPXE.5: 4 residues within 4Å:- Chain A: I.447, V.549, A.551, A.563
Ligand excluded by PLIPXE.6: 1 residues within 4Å:- Chain A: S.528
Ligand excluded by PLIPXE.7: 3 residues within 4Å:- Chain A: A.443, G.445, V.531
Ligand excluded by PLIPXE.8: 2 residues within 4Å:- Chain A: L.431, I.512
Ligand excluded by PLIPXE.9: 3 residues within 4Å:- Chain A: L.23, S.24, P.345
Ligand excluded by PLIPXE.10: 1 residues within 4Å:- Chain A: F.304
Ligand excluded by PLIPXE.11: 4 residues within 4Å:- Chain A: M.104, K.373, P.374, S.375
Ligand excluded by PLIPXE.12: 2 residues within 4Å:- Chain A: D.390, N.394
Ligand excluded by PLIPXE.13: 3 residues within 4Å:- Chain A: E.239, N.492, L.493
Ligand excluded by PLIPXE.14: 2 residues within 4Å:- Chain A: L.421, I.428
Ligand excluded by PLIPXE.15: 2 residues within 4Å:- Chain A: V.506, N.509
Ligand excluded by PLIPXE.16: 3 residues within 4Å:- Chain A: T.110, P.111, R.378
Ligand excluded by PLIPXE.21: 2 residues within 4Å:- Chain A: E.97, K.100
Ligand excluded by PLIPXE.22: 3 residues within 4Å:- Chain A: M.80, R.83, Q.557
Ligand excluded by PLIPXE.23: 1 residues within 4Å:- Chain B: K.35
Ligand excluded by PLIPXE.27: 2 residues within 4Å:- Chain B: T.207, L.590
Ligand excluded by PLIPXE.28: 0 residues within 4Å:- (No contacts)
Ligand excluded by PLIPXE.29: 5 residues within 4Å:- Chain B: V.581, M.582, L.591, T.592, I.603
Ligand excluded by PLIPXE.30: 1 residues within 4Å:- Chain B: I.527
Ligand excluded by PLIPXE.31: 5 residues within 4Å:- Chain B: I.447, V.549, A.551, A.559, A.563
Ligand excluded by PLIPXE.32: 3 residues within 4Å:- Chain B: A.443, V.444, G.445
Ligand excluded by PLIPXE.33: 2 residues within 4Å:- Chain B: I.435, L.538
Ligand excluded by PLIPXE.34: 3 residues within 4Å:- Chain B: I.420, L.431, I.512
Ligand excluded by PLIPXE.35: 1 residues within 4Å:- Chain B: Y.151
Ligand excluded by PLIPXE.36: 2 residues within 4Å:- Chain B: N.130, R.141
Ligand excluded by PLIPXE.37: 1 residues within 4Å:- Chain B: K.100
Ligand excluded by PLIPXE.38: 2 residues within 4Å:- Chain B: K.422, G.426
Ligand excluded by PLIPXE.39: 4 residues within 4Å:- Chain B: L.431, A.443, V.530, L.534
Ligand excluded by PLIPXE.50: 4 residues within 4Å:- Chain B: M.80, R.83, N.84, Q.557
Ligand excluded by PLIP- 12 x BR: BROMIDE ION(Non-covalent)
BR.17: 1 residues within 4Å:- Chain A: N.39
Ligand excluded by PLIPBR.18: 1 residues within 4Å:- Chain A: Y.121
Ligand excluded by PLIPBR.19: 2 residues within 4Å:- Chain A: L.129, N.130
Ligand excluded by PLIPBR.40: 1 residues within 4Å:- Chain B: N.39
Ligand excluded by PLIPBR.41: 2 residues within 4Å:- Chain B: S.24, P.345
Ligand excluded by PLIPBR.42: 1 residues within 4Å:- Chain B: F.304
Ligand excluded by PLIPBR.43: 3 residues within 4Å:- Chain B: M.104, P.374, S.375
Ligand excluded by PLIPBR.44: 2 residues within 4Å:- Chain B: A.274, Q.277
Ligand excluded by PLIPBR.45: 1 residues within 4Å:- Chain B: K.134
Ligand excluded by PLIPBR.46: 2 residues within 4Å:- Chain B: L.43, M.582
Ligand excluded by PLIPBR.47: 1 residues within 4Å:- Chain B: P.417
Ligand excluded by PLIPBR.48: 2 residues within 4Å:- Chain B: N.429, P.430
Ligand excluded by PLIP- 2 x T2N: 3,5-dioxa-7-thia-1-thionia-2$l^{2},4$l^{2},6$l^{3},8$l^{2}-tetraferrabicyclo[4.2.0]octane(Non-covalent)
T2N.20: 10 residues within 4Å:- Chain A: H.259, E.295, W.317, N.337, C.338, C.449, C.480, C.521, E.556
- Ligands: H2S.24
7 PLIP interactions:7 interactions with chain A,- Hydrogen bonds: A:E.295, A:C.480
- Salt bridges: A:E.556
- Metal complexes: A:C.338, A:C.449, A:C.480, A:E.556
T2N.49: 9 residues within 4Å:- Chain B: H.259, I.294, E.295, N.337, C.338, C.449, C.480, C.521, E.556
8 PLIP interactions:8 interactions with chain B,- Hydrogen bonds: B:N.337, B:C.480, B:E.556
- Salt bridges: B:E.556
- Metal complexes: B:C.338, B:C.449, B:C.480, B:E.556
- 1 x H2S: HYDROSULFURIC ACID(Non-covalent)
- 1 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Jeoung, J.H. et al., A Morphing [4Fe-3S-nO]-Cluster within a Carbon Monoxide Dehydrogenase Scaffold. Angew.Chem.Int.Ed.Engl. (2022)
- Release Date
- 2022-01-12
- Peptides
- Carbon monoxide dehydrogenase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 32 x XE: XENON(Non-functional Binders)(Non-covalent)
- 12 x BR: BROMIDE ION(Non-covalent)
- 2 x T2N: 3,5-dioxa-7-thia-1-thionia-2$l^{2},4$l^{2},6$l^{3},8$l^{2}-tetraferrabicyclo[4.2.0]octane(Non-covalent)
- 1 x H2S: HYDROSULFURIC ACID(Non-covalent)
- 1 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Jeoung, J.H. et al., A Morphing [4Fe-3S-nO]-Cluster within a Carbon Monoxide Dehydrogenase Scaffold. Angew.Chem.Int.Ed.Engl. (2022)
- Release Date
- 2022-01-12
- Peptides
- Carbon monoxide dehydrogenase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B