- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-6-6-6-6-6-6-mer
- Ligands
- 6 x SPH: SPHINGOSINE(Covalent)
- 6 x MYR: MYRISTIC ACID(Covalent)
MYR.2: 8 residues within 4Å:- Chain D: G.1, A.2, Y.31
- Chain J: A.2, T.27, I.29, Y.31
- Ligands: MYR.4
4 PLIP interactions:3 interactions with chain J, 1 interactions with chain D- Hydrophobic interactions: J:A.2, J:I.29, J:Y.31, D:Y.31
MYR.4: 4 residues within 4Å:- Chain J: G.1, A.2, Y.31
- Ligands: MYR.2
1 PLIP interactions:1 interactions with chain J- Hydrophobic interactions: J:Y.31
MYR.6: 4 residues within 4Å:- Chain P: G.1, A.2, Y.31
- Ligands: MYR.8
1 PLIP interactions:1 interactions with chain P- Hydrophobic interactions: P:Y.31
MYR.8: 8 residues within 4Å:- Chain P: A.2, T.27, I.29, Y.31
- Chain V: G.1, A.2, Y.31
- Ligands: MYR.6
4 PLIP interactions:3 interactions with chain P, 1 interactions with chain V- Hydrophobic interactions: P:A.2, P:I.29, P:Y.31, V:Y.31
MYR.10: 8 residues within 4Å:- Chain 1: G.1, A.2, Y.31
- Chain 7: A.2, T.27, I.29, Y.31
- Ligands: MYR.12
4 PLIP interactions:3 interactions with chain 7, 1 interactions with chain 1- Hydrophobic interactions: 7:A.2, 7:I.29, 7:Y.31, 1:Y.31
MYR.12: 4 residues within 4Å:- Chain 7: G.1, A.2, Y.31
- Ligands: MYR.10
1 PLIP interactions:1 interactions with chain 7- Hydrophobic interactions: 7:Y.31
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Feng, R. et al., Structural basis for neutralization of an anicteric hepatitis associated echovirus by a potent neutralizing antibody. Cell Discov (2021)
- Release Date
- 2021-07-14
- Peptides
- Capsid protein VP1: AGMSY4
Capsid protein VP2: BHNTZ5
Capsid protein VP3: CIOU06
Capsid protein VP4: DJPV17
heavy chain of 5G3 fab: EKQW28
light chain of 5G3 fab: FLRX39 - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AG
AM
AS
AY
A4
AB
BH
BN
BT
BZ
B5
BC
CI
CO
CU
C0
C6
CD
DJ
DP
DV
D1
D7
DE
FK
FQ
FW
F2
F8
FF
LL
LR
LX
L3
L9
L
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-6-6-6-6-6-6-mer
- Ligands
- 6 x SPH: SPHINGOSINE(Covalent)
- 6 x MYR: MYRISTIC ACID(Covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Feng, R. et al., Structural basis for neutralization of an anicteric hepatitis associated echovirus by a potent neutralizing antibody. Cell Discov (2021)
- Release Date
- 2021-07-14
- Peptides
- Capsid protein VP1: AGMSY4
Capsid protein VP2: BHNTZ5
Capsid protein VP3: CIOU06
Capsid protein VP4: DJPV17
heavy chain of 5G3 fab: EKQW28
light chain of 5G3 fab: FLRX39 - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AG
AM
AS
AY
A4
AB
BH
BN
BT
BZ
B5
BC
CI
CO
CU
C0
C6
CD
DJ
DP
DV
D1
D7
DE
FK
FQ
FW
F2
F8
FF
LL
LR
LX
L3
L9
L