SMTL ID : 7emc.2 (2 other biounits)

Mooring Stone-Like Arg114 Pulls Diverse Bulged Peptides: First Insight into African Swine Fever Virus-Derived T Cell Epitopes Presented by Swine Major Histocompatibility Complex Class I

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ALA- THR- GLU- ILE- ARG- GLU- LEU- LEU- VAL: ALA-THR-GLU-ILE-ARG-GLU-LEU-LEU-VAL(Non-covalent)

ALA-THR-GLU-ILE-ARG-GLU-LEU-LEU-VAL.1: 28 residues within 4Å: Chain A: Y.7, Y.9, M.45, E.63, K.66, Q.67, T.73, Y.74, V.76, G.77, N.80, L.81, Y.84, Y.95, Y.99, R.114, Y.116, Y.123, T.143, K.146, W.147, A.150, V.152, R.156, Y.159, L.163, S.167, Y.171 36 PLIP interactions: 36 interactions with chain A Hydrophobic interactions: A:Y.7, A:Y.74, A:V.76, A:L.81, A:Y.99, A:Y.123, A:T.143, A:A.150, A:V.152, A:Y.159, A:L.163 Hydrogen bonds: A:Y.7, A:E.63, A:K.66, A:K.66, A:T.73, A:Y.74, A:N.80, A:Y.84, A:Y.99, A:Y.99, A:T.143, A:R.156, A:R.156, A:Y.159, A:S.167, A:Y.171 Water bridges: A:T.70, A:T.73, A:Y.95, A:Y.95, A:W.147 Salt bridges: A:R.114, A:R.114, A:K.146, A:R.156

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yue, C. et al., Mooring Stone-Like Arg 114 Pulls Diverse Bulged Peptides: First Insight into African Swine Fever Virus-Derived T Cell Epitopes Presented by Swine Major Histocompatibility Complex Class I. J.Virol. (2022)

Release Date

2021-12-08

Peptides

Leucocyte antigen: A
Beta-2-microglobulin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

Leucocyte antigen

Beta-2-microglobulin

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