SMTL ID : 7env.1 (1 other biounit)

crystal structure of NS5 in complex with the N-terminal bromodomain of BRD2 (BRD2-BD1).

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.45 Å

Oligo State

homo-dimer

Ligands

1 x BUX: 7-chloranyl-2-[(3-chlorophenyl)amino]pyrano[3,4-e][1,3]oxazine-4,5-dione(Non-covalent)

BUX.1: 10 residues within 4Å: Chain A: W.25, P.26, Q.29, V.31, K.35, L.36, L.38, Y.41, Y.83, N.84 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.36 Hydrogen bonds: A:P.26, A:Q.29, A:N.84 pi-Stacking: A:W.25

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain B: H.21, W.25, R.28 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.28

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Arole, A.H. et al., Structural investigation of a pyrano-1,3-oxazine derivative and the phenanthridinone core moiety against BRD2 bromodomains. Acta Crystallogr.,Sect.F (2022)

Release Date

2022-03-09

Peptides

Bromodomain-containing protein 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Bromodomain-containing protein 2

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