- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 1 x CL0: CHLOROPHYLL A ISOMER(Non-covalent)
CL0.1: 23 residues within 4Å:- Chain A: Y.453, I.536, F.539, T.540, Y.598, N.599, S.602, V.603, F.606, W.644, A.653, I.657, F.671, H.675, W.678, T.737, T.738, F.741
- Chain B: L.620, W.625
- Ligands: CLA.54, CLA.55, CLA.56
19 PLIP interactions:18 interactions with chain A, 1 interactions with chain B,- Hydrophobic interactions: A:I.536, A:F.539, A:T.540, A:V.603, A:F.606, A:W.644, A:W.644, A:W.644, A:A.653, A:I.657, A:F.671, A:W.678, A:T.737, A:F.741, B:L.620
- Hydrogen bonds: A:Y.598, A:T.738
- pi-Stacking: A:F.671, A:W.678
- 136 x CLA: CHLOROPHYLL A(Non-covalent)
CLA.2: 26 residues within 4Å:- Chain A: F.676, A.679, F.680, L.682, M.683, F.686, Y.691, W.692, L.695
- Chain B: S.423, S.426, L.427, G.430, F.431, L.434, L.525, T.529, L.532, I.533, L.578, F.581, W.582
- Ligands: CLA.39, BCR.49, CLA.55, BCR.108
12 PLIP interactions:7 interactions with chain A, 5 interactions with chain B,- Hydrophobic interactions: A:F.676, A:A.679, A:F.680, A:L.682, A:F.686, A:Y.691, A:W.692, B:L.427, B:T.529, B:I.533, B:L.578, B:F.581
CLA.3: 13 residues within 4Å:- Chain A: P.29, G.30, I.46, L.49, H.50
- Chain I: P.12, S.15
- Ligands: CLA.4, CLA.8, CLA.10, PQN.41, BCR.51, CLA.52
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain I,- Hydrophobic interactions: A:P.29, I:P.12
- pi-Stacking: A:H.50
- Metal complexes: A:H.50
CLA.4: 11 residues within 4Å:- Chain A: W.26, H.31, F.32, H.50, A.53, H.54, I.80
- Ligands: CLA.3, CLA.5, CLA.6, CLA.10
6 PLIP interactions:6 interactions with chain A,- Hydrophobic interactions: A:W.26, A:H.50, A:A.53, A:I.80
- Salt bridges: A:H.31
- Metal complexes: A:H.54
CLA.5: 21 residues within 4Å:- Chain A: H.54, F.56, V.70, A.73, H.74, Q.77, L.78, I.81, L.85, W.346, H.347, L.350, N.353, L.354, L.357
- Ligands: CLA.4, CLA.6, CLA.12, CLA.29, BCR.45, BCR.46
13 PLIP interactions:13 interactions with chain A,- Hydrophobic interactions: A:F.56, A:V.70, A:A.73, A:Q.77, A:L.78, A:I.81, A:L.85, A:W.346, A:W.346, A:L.350
- Hydrogen bonds: A:N.353
- pi-Cation interactions: A:H.74
- Metal complexes: A:H.74
CLA.6: 11 residues within 4Å:- Chain A: H.54, Q.77, I.81, W.84, I.394
- Ligands: CLA.4, CLA.5, CLA.27, CLA.28, CLA.29, LHG.43
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:I.81, A:W.84, A:W.84, A:I.394
- Salt bridges: A:H.54
CLA.7: 10 residues within 4Å:- Chain A: L.83, W.84, G.87, F.90, H.91, F.95, V.114, W.116
- Ligands: CLA.8, BCR.116
4 PLIP interactions:4 interactions with chain A,- Hydrophobic interactions: A:L.83, A:F.90, A:W.116
- Metal complexes: A:H.91
CLA.8: 20 residues within 4Å:- Chain A: W.84, M.88, A.112, Q.113, I.135, Q.136, I.137, T.138, S.139, A.666, Y.667, W.739
- Ligands: CLA.3, CLA.7, CLA.9, CLA.27, LHG.43, BCR.51, CLA.55, BCR.116
7 PLIP interactions:7 interactions with chain A,- Hydrophobic interactions: A:T.138, A:A.666, A:Y.667, A:W.739
- Hydrogen bonds: A:T.138, A:S.139, A:S.139
CLA.9: 12 residues within 4Å:- Chain A: Q.113, V.115, W.116, I.118, Q.121, L.124
- Chain I: I.27
- Ligands: CLA.8, CLA.27, BCR.51, CLA.87, BCR.116
8 PLIP interactions:6 interactions with chain A, 2 interactions with chain I,- Hydrophobic interactions: A:V.115, A:I.118, A:L.124, I:I.27, I:I.27
- Hydrogen bonds: A:Q.113, A:W.116, A:Q.121
CLA.10: 18 residues within 4Å:- Chain A: V.19, K.20, T.21, S.22, F.23, E.25, W.26, H.31, K.69, S.72, L.171, G.174, W.175, Y.178, H.179
- Chain I: Y.7
- Ligands: CLA.3, CLA.4
7 PLIP interactions:7 interactions with chain A,- Hydrophobic interactions: A:T.21, A:F.23, A:E.25, A:L.171, A:W.175, A:Y.178
- Salt bridges: A:H.31
CLA.11: 11 residues within 4Å:- Chain A: V.10, K.11, I.12, W.187, S.193, H.197, N.312, W.313
- Ligands: CLA.12, CLA.19, CLA.165
6 PLIP interactions:6 interactions with chain A,- Hydrophobic interactions: A:I.12, A:W.313
- Hydrogen bonds: A:S.193
- pi-Stacking: A:H.197, A:H.197
- Metal complexes: A:H.197
CLA.12: 12 residues within 4Å:- Chain A: F.71, H.74, F.75, W.187, F.188, M.194, H.197, H.198, G.201
- Ligands: CLA.5, CLA.11, CLA.165
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:W.187, A:W.187, A:F.188, A:H.197
- Hydrogen bonds: A:H.74
- Salt bridges: A:H.74
- pi-Stacking: A:H.198, A:H.198
CLA.13: 18 residues within 4Å:- Chain A: S.148, G.149, I.150, Q.155, C.158, T.159, G.206, S.209, W.210, H.213, H.216, V.217, P.237, I.241
- Ligands: CLA.14, CLA.15, BCR.45, BCR.46
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:T.159, A:W.210, A:H.213, A:H.216, A:V.217, A:I.241
- pi-Stacking: A:W.210
- pi-Cation interactions: A:H.213
CLA.14: 10 residues within 4Å:- Chain A: L.208, G.212, H.216, I.241, R.244, F.254, G.257
- Ligands: CLA.13, BCR.45, BCR.53
6 PLIP interactions:6 interactions with chain A,- Hydrophobic interactions: A:I.241, A:F.254, A:F.254
- Hydrogen bonds: A:R.244
- pi-Stacking: A:H.216
- Metal complexes: A:H.216
CLA.15: 5 residues within 4Å:- Chain A: C.158, L.236, H.238
- Ligands: CLA.13, BCR.45
3 PLIP interactions:3 interactions with chain A,- Hydrophobic interactions: A:H.238
- Salt bridges: A:H.238
- pi-Stacking: A:H.238
CLA.16: 15 residues within 4Å:- Chain A: F.261, W.266, Y.269, L.273, T.274, F.275, H.293, L.296, A.297, I.300
- Chain J: V.114, L.118
- Ligands: CLA.17, CLA.34, CLA.119
11 PLIP interactions:9 interactions with chain A, 2 interactions with chain J,- Hydrophobic interactions: A:F.261, A:W.266, A:L.273, A:L.273, A:L.296, A:A.297, A:I.300, J:V.114, J:L.118
- pi-Stacking: A:H.293
- Metal complexes: A:H.293
CLA.17: 12 residues within 4Å:- Chain A: T.274, F.275, D.290, H.293, H.294, A.297, I.298, H.367, T.503
- Ligands: CLA.16, CLA.18, CLA.26
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:F.275, A:D.290, A:H.294, A:I.298
- Hydrogen bonds: A:H.367
- pi-Stacking: A:H.294
- pi-Cation interactions: A:H.294
- Metal complexes: A:H.294
CLA.18: 14 residues within 4Å:- Chain A: L.144, A.147, L.203, G.206, S.207, W.210, Q.214, I.291, H.294, H.295, F.302, Y.374
- Ligands: CLA.17, BCR.46
10 PLIP interactions:10 interactions with chain A,- Hydrophobic interactions: A:L.203, A:W.210, A:I.291, A:F.302, A:Y.374
- Salt bridges: A:H.295
- pi-Stacking: A:W.210, A:H.294, A:H.295
- Metal complexes: A:H.295
CLA.19: 15 residues within 4Å:- Chain A: N.196, H.197, A.200, L.205, H.307, Y.309, T.311, W.313, I.315
- Chain J: A.100, L.103, A.104
- Ligands: CLA.11, BCR.53, BCR.121
8 PLIP interactions:7 interactions with chain A, 1 interactions with chain J,- Hydrophobic interactions: A:A.200, A:L.205, A:W.313, A:I.315, J:L.103
- pi-Stacking: A:H.307, A:H.307
- Metal complexes: A:H.307
CLA.20: 15 residues within 4Å:- Chain A: L.195, L.301, F.302, A.305, M.308, Y.309, L.319, I.322
- Ligands: CLA.21, CLA.22, CLA.23, CLA.24, CLA.26, BCR.47, BCR.48
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:L.195, A:L.301, A:F.302, A:A.305
- Hydrogen bonds: A:Y.309
CLA.21: 13 residues within 4Å:- Chain A: I.304, H.307, M.308, I.315, G.316, H.317
- Chain J: P.70, K.75, A.76
- Ligands: CLA.20, CLA.22, BCR.53, CLA.122
8 PLIP interactions:5 interactions with chain A, 3 interactions with chain J,- Hydrophobic interactions: A:I.304, A:M.308, A:I.315, J:P.70, J:A.76
- Hydrogen bonds: A:G.316, J:A.76
- pi-Cation interactions: A:H.317
CLA.22: 9 residues within 4Å:- Chain A: H.317, I.322, A.325, H.326
- Chain J: A.78
- Ligands: CLA.20, CLA.21, CLA.23, CLA.42
3 PLIP interactions:2 interactions with chain A, 1 interactions with chain J,- Hydrophobic interactions: A:A.325, J:A.78
- Metal complexes: A:H.326
CLA.23: 17 residues within 4Å:- Chain A: I.322, L.323, H.326, H.335, L.338, N.421, L.423, L.424, V.427
- Ligands: CLA.20, CLA.22, CLA.24, CLA.30, CLA.42, LHG.44, BCR.47, BCR.48
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:L.338, A:L.338, A:V.427
- Salt bridges: A:H.326
- Metal complexes: A:H.335
CLA.24: 17 residues within 4Å:- Chain A: V.191, M.194, L.195, H.198, L.199, L.319, L.323, Y.339, L.342, T.343, L.352, N.353, M.356
- Ligands: CLA.20, CLA.23, CLA.26, BCR.47
11 PLIP interactions:11 interactions with chain A,- Hydrophobic interactions: A:V.191, A:M.194, A:L.195, A:L.195, A:L.195, A:L.319, A:L.323, A:Y.339, A:L.342, A:M.356
- Salt bridges: A:H.198
CLA.25: 13 residues within 4Å:- Chain A: I.362, V.363, H.366, I.399, I.541, T.544, V.545, A.600
- Ligands: CLA.26, CLA.35, CLA.36, CLA.37, BCR.48
6 PLIP interactions:6 interactions with chain A,- Hydrophobic interactions: A:I.362, A:I.362, A:I.399, A:T.544, A:A.600
- Salt bridges: A:H.366
CLA.26: 18 residues within 4Å:- Chain A: M.356, T.360, V.363, H.366, H.367, S.370, M.371, T.503, S.504, T.506, W.507
- Ligands: CLA.17, CLA.20, CLA.24, CLA.25, CLA.33, CLA.35, BCR.48
6 PLIP interactions:6 interactions with chain A,- Hydrophobic interactions: A:W.507, A:W.507, A:W.507
- pi-Cation interactions: A:H.367, A:H.367, A:H.367
CLA.27: 20 residues within 4Å:- Chain A: W.84, M.88, T.138, S.139, F.141, S.386, T.389, H.390, W.393, I.394, F.670, I.735, W.739
- Ligands: CLA.6, CLA.8, CLA.9, CLA.28, BCR.49, CLA.55, BCR.116
11 PLIP interactions:11 interactions with chain A,- Hydrophobic interactions: A:T.389, A:H.390, A:W.393, A:I.394, A:F.670, A:I.735, A:I.735, A:W.739, A:W.739
- pi-Stacking: A:W.739
- Metal complexes: A:H.390
CLA.28: 15 residues within 4Å:- Chain A: W.84, S.139, G.140, L.357, T.361, V.364, M.368, Y.374, L.387, H.390, H.391, I.394
- Ligands: CLA.6, CLA.27, BCR.46
9 PLIP interactions:9 interactions with chain A,- Hydrophobic interactions: A:L.357, A:V.364, A:L.387, A:I.394, A:I.394
- Hydrogen bonds: A:Y.374
- pi-Stacking: A:H.390, A:H.391
- Metal complexes: A:H.391
CLA.29: 19 residues within 4Å:- Chain A: H.50, A.51, H.54, D.55, L.350, F.397, V.400, G.401, A.404, H.405, I.408, R.412, F.569, R.570, W.587
- Ligands: CLA.5, CLA.6, CLA.39, LHG.43
10 PLIP interactions:10 interactions with chain A,- Hydrophobic interactions: A:L.350, A:V.400, A:A.404
- Hydrogen bonds: A:A.53, A:H.54, A:D.55
- Salt bridges: A:R.412, A:R.570
- pi-Stacking: A:H.405
- Metal complexes: A:H.405
CLA.30: 12 residues within 4Å:- Chain A: F.330, T.331, L.423, R.426, H.430, H.437
- Chain K: T.66, P.67
- Ligands: CLA.23, CLA.37, LHG.44, CLA.123
7 PLIP interactions:6 interactions with chain A, 1 interactions with chain K,- Hydrophobic interactions: A:L.423, A:H.437, K:T.66
- Hydrogen bonds: A:R.426
- Salt bridges: A:R.426, A:H.430
- Metal complexes: A:H.430
CLA.31: 12 residues within 4Å:- Chain A: W.440, I.443, F.444, F.447, H.448
- Ligands: CLA.32, CLA.40, CLA.57, BCR.102, BCR.105, BCR.114, BCR.127
3 PLIP interactions:3 interactions with chain A,- Hydrophobic interactions: A:F.447
- pi-Stacking: A:F.444
- Metal complexes: A:H.448
CLA.32: 13 residues within 4Å:- Chain A: F.447, I.454, H.455, M.459, R.464
- Chain B: H.95
- Chain K: T.112
- Ligands: CLA.31, CLA.57, CLA.63, CLA.64, BCR.105, BCR.114
6 PLIP interactions:6 interactions with chain A,- Hydrophobic interactions: A:I.454, A:H.455
- Hydrogen bonds: A:R.464
- pi-Stacking: A:H.455, A:H.455
- Metal complexes: A:H.455
CLA.33: 10 residues within 4Å:- Chain A: I.487, H.488, A.491, T.495, A.496, T.503
- Ligands: CLA.26, CLA.34, CLA.35, BCR.48
3 PLIP interactions:3 interactions with chain A,- Hydrophobic interactions: A:T.495, A:T.503
- Metal complexes: A:H.488
CLA.34: 8 residues within 4Å:- Chain A: F.275, T.495, A.496, P.497, G.498
- Ligands: CLA.16, CLA.33, CLA.119
3 PLIP interactions:3 interactions with chain A,- Hydrophobic interactions: A:T.495
- Hydrogen bonds: A:G.498
- Metal complexes: A:T.495
CLA.35: 19 residues within 4Å:- Chain A: H.366, Y.369, F.480, A.481, W.483, Q.485, W.507, I.524, H.534, H.537, I.541, V.604, H.607, F.608
- Ligands: CLA.25, CLA.26, CLA.33, CLA.36, CLA.37
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:Y.369, A:W.483, A:I.524, A:H.537, A:I.541, A:V.604, A:F.608
- Hydrogen bonds: A:Q.485
CLA.36: 12 residues within 4Å:- Chain A: P.478, I.479, F.480, A.481, F.531, H.534, H.535, A.538, H.542
- Ligands: CLA.25, CLA.35, CLA.37
11 PLIP interactions:11 interactions with chain A,- Hydrophobic interactions: A:F.480, A:F.531, A:A.538
- Hydrogen bonds: A:F.480, A:A.481
- Salt bridges: A:H.534, A:H.535
- pi-Stacking: A:F.531, A:H.535, A:H.535
- Metal complexes: A:H.535
CLA.37: 9 residues within 4Å:- Chain A: I.434, V.441, A.538, I.541, H.542
- Ligands: CLA.25, CLA.30, CLA.35, CLA.36
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:I.434, A:V.441, A:I.541
- Salt bridges: A:H.542
- Metal complexes: A:H.542
CLA.38: 19 residues within 4Å:- Chain A: I.699, A.702, H.703, V.708
- Chain B: S.420, S.423, W.424, L.427
- Chain F: G.175, G.178, Y.181, I.198, A.203
- Ligands: PQN.41, CLA.52, CLA.85, CLA.86, BCR.108, CLA.109
7 PLIP interactions:3 interactions with chain F, 3 interactions with chain A, 1 interactions with chain B,- Hydrophobic interactions: F:Y.181, F:I.198, F:A.203, A:I.699, A:V.708, B:L.427
- Metal complexes: A:H.703
CLA.39: 15 residues within 4Å:- Chain A: W.47, F.680, F.684, L.717, Q.721, V.725, T.728, H.729, L.732
- Ligands: CLA.2, CLA.29, PQN.41, LHG.43, BCR.49, CLA.55
11 PLIP interactions:11 interactions with chain A,- Hydrophobic interactions: A:W.47, A:F.680, A:F.684, A:L.717, A:V.725, A:T.728, A:L.732
- Hydrogen bonds: A:Q.721
- pi-Stacking: A:H.729, A:H.729
- Metal complexes: A:H.729
CLA.40: 15 residues within 4Å:- Chain A: S.436, N.439, W.440, I.443
- Chain B: L.678, A.681, H.682, T.685, A.688
- Ligands: CLA.31, CLA.93, BCR.102, CLA.123, CLA.125, BCR.127
5 PLIP interactions:4 interactions with chain B, 1 interactions with chain A,- Hydrophobic interactions: B:L.678, B:T.685, B:A.688, A:I.443
- pi-Stacking: B:H.682
CLA.42: 8 residues within 4Å:- Chain A: H.326, K.327, P.329, F.330
- Ligands: CLA.22, CLA.23, LHG.44, BCR.47
2 PLIP interactions:2 interactions with chain A,- Hydrophobic interactions: A:H.326, A:P.329
CLA.52: 21 residues within 4Å:- Chain A: T.43, I.46, W.47, I.696, V.700, H.703, V.708, P.710, P.714, R.715
- Chain F: Y.181, L.182, E.195, I.198
- Chain I: A.11, L.14, S.15, W.18
- Ligands: CLA.3, CLA.38, PQN.41
15 PLIP interactions:9 interactions with chain A, 4 interactions with chain I, 2 interactions with chain F,- Hydrophobic interactions: A:T.43, A:I.46, A:W.47, A:I.696, A:V.700, A:V.708, A:P.710, A:P.714, A:P.714, I:L.14, I:W.18, I:W.18, I:W.18, F:L.182, F:I.198
CLA.54: 21 residues within 4Å:- Chain A: F.450, I.454, D.457, F.539, W.596, N.599, I.641, L.645, Y.730
- Chain B: W.648, L.651, H.654, L.655, W.657, A.658
- Ligands: CL0.1, CLA.56, CLA.57, CLA.63, CLA.64, BCR.102
16 PLIP interactions:9 interactions with chain A, 7 interactions with chain B,- Hydrophobic interactions: A:F.450, A:F.450, A:F.450, A:I.454, A:I.454, A:F.539, A:W.596, A:I.641, A:Y.730, B:W.648, B:W.648, B:L.655, B:L.655, B:A.658
- Hydrogen bonds: B:H.654
- Salt bridges: B:H.654
CLA.55: 21 residues within 4Å:- Chain A: L.669, L.672, H.675, F.676, W.678, A.679
- Chain B: V.438, D.441, F.581, W.582, N.585, W.589, L.616, L.620
- Ligands: CL0.1, CLA.2, CLA.8, CLA.27, CLA.39, CLA.56, CLA.87
11 PLIP interactions:5 interactions with chain B, 6 interactions with chain A,- Hydrophobic interactions: B:V.438, B:W.582, B:W.582, B:N.585, A:L.669, A:L.669, A:H.675, A:F.676, A:W.678, A:A.679
- pi-Stacking: B:W.589
CLA.56: 22 residues within 4Å:- Chain A: L.645, L.649, W.650
- Chain B: T.433, Y.437, A.522, N.585, W.589, F.592, W.619, S.628, I.632, F.650, H.654, W.657, Y.717, T.720, Y.721, F.724
- Ligands: CL0.1, CLA.54, CLA.55
16 PLIP interactions:14 interactions with chain B, 2 interactions with chain A,- Hydrophobic interactions: B:T.433, B:Y.437, B:A.522, B:W.589, B:F.592, B:W.619, B:I.632, B:W.657, B:W.657, B:W.657, B:Y.717, B:F.724, A:L.645, A:L.649
- pi-Stacking: B:F.650, B:W.657
CLA.57: 23 residues within 4Å:- Chain A: N.439, C.442, I.443, G.446, F.447, F.450, G.451, F.539, L.546, I.547, F.595, W.596
- Chain B: A.658, T.659, F.661, M.662, Y.670, W.671
- Ligands: CLA.31, CLA.32, CLA.54, CLA.94, BCR.102
11 PLIP interactions:6 interactions with chain A, 5 interactions with chain B,- Hydrophobic interactions: A:F.450, A:F.539, A:I.547, A:F.595, B:A.658, B:F.661, B:Y.670, B:W.671
- pi-Stacking: A:W.596, A:W.596
- Hydrogen bonds: B:Y.670
CLA.58: 12 residues within 4Å:- Chain B: F.5, F.8, G.24, I.25, A.28, H.29, F.31, S.49
- Ligands: CLA.59, CLA.60, CLA.83, BCR.127
6 PLIP interactions:6 interactions with chain B,- Hydrophobic interactions: B:F.5, B:I.25, B:A.28, B:F.31
- Salt bridges: B:H.34
- Metal complexes: B:H.29
CLA.59: 14 residues within 4Å:- Chain B: H.29, F.31, I.46, S.49, H.50, Q.53, I.330, L.334, A.337, L.338, L.341
- Ligands: CLA.58, CLA.60, CLA.83
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:F.31, B:I.46, B:I.46, B:Q.53, B:I.330, B:L.334
- Metal complexes: B:H.50
CLA.60: 14 residues within 4Å:- Chain B: H.29, Q.53, I.56, W.60, L.341, I.378, I.382
- Ligands: CLA.58, CLA.59, CLA.81, CLA.82, CLA.83, BCR.98, DGD.103
8 PLIP interactions:8 interactions with chain B,- Hydrophobic interactions: B:I.56, B:W.60, B:W.60, B:W.60, B:L.341, B:I.378, B:I.382
- Salt bridges: B:H.29
CLA.61: 16 residues within 4Å:- Chain B: L.59, G.63, F.66, H.67, W.70, Q.71, H.89, A.90
- Chain H: L.6, P.7, F.10, V.11, V.14
- Ligands: CLA.62, CLA.63, BCR.114
9 PLIP interactions:6 interactions with chain B, 3 interactions with chain H,- Hydrophobic interactions: B:L.59, B:F.66, B:W.70, B:W.70, H:L.6, H:F.10, H:V.14
- Hydrogen bonds: B:Q.71
- pi-Stacking: B:H.67
CLA.62: 16 residues within 4Å:- Chain B: H.67, V.68, A.88, H.89, N.114, I.115, A.116, Y.117, S.118, V.645, W.646, M.649
- Ligands: CLA.61, CLA.63, BCR.102, BCR.114
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:A.88, B:V.645, B:W.646
- Hydrogen bonds: B:Y.117, B:S.118, B:S.118
- Metal complexes: B:H.89
CLA.63: 18 residues within 4Å:- Chain A: A.461, L.462
- Chain B: H.89, I.91, W.92, D.93, H.95, F.96, N.114, S.644, V.645
- Chain H: V.11
- Ligands: CLA.32, CLA.54, CLA.61, CLA.62, CLA.64, BCR.102
7 PLIP interactions:6 interactions with chain B, 1 interactions with chain A,- Hydrophobic interactions: B:I.91, B:V.645, A:L.462
- Hydrogen bonds: B:W.92, B:N.114
- pi-Stacking: B:F.96
- Metal complexes: B:D.93
CLA.64: 14 residues within 4Å:- Chain B: P.94, H.95
- Chain G: V.116, L.124
- Chain H: G.15, L.16
- Chain K: F.109, P.114, A.124
- Ligands: CLA.32, CLA.54, CLA.63, BCR.105, BCR.114
7 PLIP interactions:2 interactions with chain K, 3 interactions with chain B, 1 interactions with chain G, 1 interactions with chain H,- Hydrophobic interactions: K:P.114, K:A.124, B:P.94, G:V.116, H:L.16
- pi-Stacking: B:H.95
- Metal complexes: B:H.95
CLA.65: 11 residues within 4Å:- Chain B: F.47, F.51, A.152, L.155, H.156, K.160, W.161, P.163, W.167
- Ligands: CLA.66, CLA.67
8 PLIP interactions:8 interactions with chain B,- Hydrophobic interactions: B:F.47, B:F.51, B:A.152, B:L.155, B:P.163, B:W.167, B:W.167
- Metal complexes: B:H.156
CLA.66: 9 residues within 4Å:- Chain B: W.167, N.170, S.173, H.177, T.293, F.295
- Ligands: CLA.65, CLA.67, CLA.74
5 PLIP interactions:5 interactions with chain B,- Hydrophobic interactions: B:F.295
- Hydrogen bonds: B:S.173
- pi-Stacking: B:H.177, B:H.177
- Metal complexes: B:H.177
CLA.67: 11 residues within 4Å:- Chain B: F.47, H.50, F.51, W.167, R.174, H.177, H.178, L.182
- Ligands: CLA.65, CLA.66, BCR.98
10 PLIP interactions:10 interactions with chain B,- Hydrophobic interactions: B:F.47, B:W.167, B:W.167, B:W.167, B:R.174, B:H.177
- Salt bridges: B:H.50
- pi-Stacking: B:H.178
- pi-Cation interactions: B:H.178
- Metal complexes: B:H.178
CLA.68: 14 residues within 4Å:- Chain B: L.129, D.134, F.141, S.186, A.189, W.190, G.192, H.193, V.197, R.208, W.209, F.212
- Ligands: CLA.69, BCR.99
17 PLIP interactions:17 interactions with chain B,- Hydrophobic interactions: B:F.141, B:A.189, B:W.190, B:W.190, B:H.193, B:W.209, B:W.209, B:W.209, B:F.212, B:F.212
- Hydrogen bonds: B:W.209
- Salt bridges: B:R.208
- pi-Stacking: B:W.190, B:W.209, B:W.209, B:W.209
- pi-Cation interactions: B:H.193
CLA.69: 17 residues within 4Å:- Chain B: L.188, A.189, T.191, G.192, V.195, H.196, F.212, L.213, V.215, L.216, P.217, G.221, L.222
- Ligands: CLA.68, BCR.97, BCR.98, BCR.99
5 PLIP interactions:5 interactions with chain B,- Hydrophobic interactions: B:A.189, B:T.191, B:V.195, B:P.217, B:L.222
CLA.70: 11 residues within 4Å:- Chain B: L.225, W.230, N.231, A.234, L.257, H.275, L.278, A.279, F.282, L.492
- Ligands: CLA.71
10 PLIP interactions:10 interactions with chain B,- Hydrophobic interactions: B:L.225, B:W.230, B:W.230, B:A.234, B:L.278, B:A.279, B:F.282
- pi-Stacking: B:H.275, B:H.275
- Metal complexes: B:H.275
CLA.71: 16 residues within 4Å:- Chain B: L.257, G.259, D.272, M.273, H.275, H.276, A.279, I.280, I.283, H.351, W.497
- Ligands: CLA.70, CLA.72, CLA.80, CLA.88, CLA.89
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:L.257, B:D.272, B:H.276, B:A.279, B:I.280, B:I.283
- Metal complexes: B:H.276
CLA.72: 13 residues within 4Å:- Chain B: W.123, I.127, F.183, S.186, S.187, W.190, M.273, H.276, H.277, I.280, P.357, Y.358
- Ligands: CLA.71
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:W.190, B:W.190, B:I.280, B:P.357
- Salt bridges: B:H.277
- pi-Stacking: B:W.190, B:H.276, B:H.277
- Metal complexes: B:H.277
CLA.73: 12 residues within 4Å:- Chain B: L.175, L.179, I.283, F.284, A.287, M.290, Y.291, I.301, L.304
- Ligands: CLA.76, CLA.77, CLA.78
5 PLIP interactions:5 interactions with chain B,- Hydrophobic interactions: B:L.175, B:L.179, B:I.283, B:F.284, B:A.287
CLA.74: 11 residues within 4Å:- Chain B: N.176, H.177, S.180, L.285, H.289, Y.291, T.293, F.295, I.297
- Ligands: CLA.66, BCR.97
8 PLIP interactions:8 interactions with chain B,- Hydrophobic interactions: B:N.176, B:L.285, B:F.295, B:F.295, B:I.297
- Hydrogen bonds: B:N.176
- pi-Stacking: B:H.289
- Metal complexes: B:H.289
CLA.75: 8 residues within 4Å:- Chain B: I.286, H.289, M.290, I.297, G.298, H.299
- Ligands: CLA.76, BCR.97
2 PLIP interactions:2 interactions with chain B,- Hydrophobic interactions: B:I.297
- Hydrogen bonds: B:G.298
CLA.76: 9 residues within 4Å:- Chain B: H.299, L.304, A.307, H.308
- Ligands: CLA.73, CLA.75, CLA.77, CLA.95, BCR.100
2 PLIP interactions:2 interactions with chain B,- Hydrophobic interactions: B:L.304
- pi-Stacking: B:H.308
CLA.77: 16 residues within 4Å:- Chain B: L.305, H.308, L.315, H.319, L.322, I.326, V.407, L.408, M.411
- Ligands: CLA.73, CLA.76, CLA.78, CLA.84, CLA.95, BCR.100, LHG.104
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:L.305, B:L.315, B:L.322, B:I.326, B:V.407, B:V.407, B:L.408
- Salt bridges: B:H.308
- Metal complexes: B:H.319
CLA.78: 13 residues within 4Å:- Chain B: A.171, R.174, L.175, H.178, L.179, F.183, I.301, Y.323, N.327, A.337, S.340
- Ligands: CLA.73, CLA.77
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:L.175, B:L.175, B:L.175, B:I.301, B:Y.323, B:A.337
- Hydrogen bonds: B:R.174, B:H.178
- Salt bridges: B:H.178
CLA.79: 14 residues within 4Å:- Chain B: S.346, L.347, Q.350, Q.376, M.383, F.387, L.527, T.530, I.587
- Ligands: CLA.80, CLA.90, CLA.91, CLA.92, BCR.101
5 PLIP interactions:5 interactions with chain B,- Hydrophobic interactions: B:F.387, B:L.527, B:I.587
- Hydrogen bonds: B:Q.350, B:Q.376
CLA.80: 11 residues within 4Å:- Chain B: L.347, Q.350, H.351, S.354, L.508, F.509
- Ligands: CLA.71, CLA.79, CLA.88, CLA.90, BCR.101
6 PLIP interactions:6 interactions with chain B,- Hydrophobic interactions: B:L.508, B:F.509
- pi-Stacking: B:H.351
- pi-Cation interactions: B:H.351, B:H.351
- Metal complexes: B:H.351
CLA.81: 12 residues within 4Å:- Chain B: W.60, N.64, S.118, A.370, L.371, T.373, H.374, Y.377, I.378, I.718
- Ligands: CLA.60, CLA.82
6 PLIP interactions:6 interactions with chain B,- Hydrophobic interactions: B:L.371, B:T.373, B:H.374, B:Y.377, B:I.378
- pi-Stacking: B:H.374
CLA.82: 15 residues within 4Å:- Chain B: W.60, S.118, G.119, I.344, T.345, V.348, M.352, Y.358, L.371, H.374, H.375, I.378
- Ligands: CLA.60, CLA.81, BCR.98
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:I.344, B:V.348, B:L.371, B:I.378
- pi-Stacking: B:H.374, B:H.375, B:H.375
CLA.83: 21 residues within 4Å:- Chain B: I.25, A.26, T.27, A.28, H.29, D.30, L.334, F.381, I.382, G.385, H.389, I.392, R.396, Y.555, W.573, F.576
- Ligands: CLA.58, CLA.59, CLA.60, CLA.94, DGD.103
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:D.30, B:L.334, B:L.334, B:F.576, B:F.576
- Hydrogen bonds: B:H.29, B:D.30
- Salt bridges: B:R.396
- Metal complexes: B:H.389
CLA.84: 10 residues within 4Å:- Chain B: R.314, L.315, R.410, M.411, H.414, H.421
- Ligands: CLA.77, CLA.85, CLA.92, CLA.95
6 PLIP interactions:6 interactions with chain B,- Hydrophobic interactions: B:L.315, B:H.421
- Hydrogen bonds: B:R.410
- Salt bridges: B:R.410, B:H.414
- Metal complexes: B:H.414
CLA.85: 9 residues within 4Å:- Chain A: K.705
- Chain B: H.421, W.424
- Chain F: V.227
- Ligands: CLA.38, CLA.84, CLA.86, CLA.92, BCR.111
4 PLIP interactions:1 interactions with chain A, 2 interactions with chain B, 1 interactions with chain F,- Salt bridges: A:K.705
- pi-Stacking: B:H.421, B:H.421
- Hydrophobic interactions: F:V.227
CLA.86: 18 residues within 4Å:- Chain B: W.424, L.427, F.428, F.431, H.432
- Chain F: F.160, G.164, F.167, A.171, G.172, W.213
- Ligands: CLA.38, BCR.49, CLA.85, CLA.87, CLA.91, BCR.108, BCR.111
7 PLIP interactions:4 interactions with chain F, 3 interactions with chain B,- Hydrophobic interactions: F:F.167, F:A.171, F:W.213, B:F.431
- pi-Stacking: F:F.167, B:H.432
- Metal complexes: B:H.432
CLA.87: 18 residues within 4Å:- Chain A: V.119
- Chain B: G.435, L.436, V.438, H.439, M.443, K.451, I.453
- Chain I: D.35, A.36, L.37
- Ligands: CLA.9, BCR.49, CLA.55, CLA.86, BCR.108, BCR.116, DGD.117
11 PLIP interactions:3 interactions with chain I, 7 interactions with chain B, 1 interactions with chain A,- Hydrophobic interactions: I:A.36, B:V.438, B:H.439, A:V.119
- Hydrogen bonds: I:N.30, I:D.35, B:K.451
- Salt bridges: B:H.439, B:K.451
- pi-Stacking: B:H.439
- Metal complexes: B:H.439
CLA.88: 11 residues within 4Å:- Chain B: W.462, A.466, H.467, L.478, W.493, W.497
- Ligands: CLA.71, CLA.80, CLA.89, CLA.90, BCR.101
5 PLIP interactions:5 interactions with chain B,- Hydrophobic interactions: B:W.462, B:A.466, B:L.478
- pi-Cation interactions: B:H.467
- Metal complexes: B:H.467
CLA.89: 6 residues within 4Å:- Chain B: L.477, A.485, A.488, W.493
- Ligands: CLA.71, CLA.88
3 PLIP interactions:3 interactions with chain B,- Hydrophobic interactions: B:L.477, B:A.485, B:W.493
CLA.90: 20 residues within 4Å:- Chain B: Q.350, Y.353, Y.372, F.459, A.460, I.463, Q.464, F.509, L.510, I.512, H.520, I.523, V.590, Y.593, K.597
- Ligands: CLA.79, CLA.80, CLA.88, CLA.91, CLA.110
11 PLIP interactions:11 interactions with chain B,- Hydrophobic interactions: B:I.463, B:I.512, B:I.523, B:I.523, B:V.590, B:Y.593, B:Y.593, B:Y.593, B:K.597
- Hydrogen bonds: B:Q.464
- pi-Cation interactions: B:H.520
CLA.91: 21 residues within 4Å:- Chain B: F.428, L.429, E.456, P.457, I.458, F.459, A.460, F.517, H.520, H.521, A.524, H.528
- Chain F: V.150, F.160, V.165
- Ligands: CLA.79, CLA.86, CLA.90, CLA.92, BCR.111, DGD.117
16 PLIP interactions:14 interactions with chain B, 2 interactions with chain F,- Hydrophobic interactions: B:F.428, B:F.428, B:F.428, B:L.429, B:L.429, B:F.459, B:F.459, B:A.524, F:F.160, F:V.165
- Hydrogen bonds: B:F.459, B:A.460
- Salt bridges: B:H.520
- pi-Stacking: B:F.517
- pi-Cation interactions: B:H.521
- Metal complexes: B:H.521
CLA.92: 10 residues within 4Å:- Chain B: I.418, L.422, A.524, L.527, H.528
- Ligands: CLA.79, CLA.84, CLA.85, CLA.91, BCR.101
6 PLIP interactions:6 interactions with chain B,- Hydrophobic interactions: B:I.418, B:L.422, B:L.422, B:L.527
- pi-Stacking: B:H.528
- Metal complexes: B:H.528
CLA.93: 18 residues within 4Å:- Chain B: T.18, I.21, W.22, I.675, A.679, H.682, I.691, W.693, R.694, D.695, P.697, V.698
- Chain H: F.27, Q.31
- Chain K: Y.143
- Ligands: CLA.40, PQN.96, BCR.127
8 PLIP interactions:7 interactions with chain B, 1 interactions with chain H,- Hydrophobic interactions: B:I.21, B:W.22, B:I.675, B:W.693, B:P.697, B:P.697, H:F.27
- Hydrogen bonds: B:R.694
CLA.94: 14 residues within 4Å:- Chain B: W.22, F.652, L.655, V.656, T.659, F.663, V.708, A.711, H.712
- Ligands: CLA.57, CLA.83, PQN.96, BCR.102, DGD.103
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:F.652, B:L.655, B:V.656, B:F.663
- Salt bridges: B:H.712
- pi-Stacking: B:H.712
- Metal complexes: B:H.712
CLA.95: 13 residues within 4Å:- Chain B: A.307, H.308, T.309, P.310, P.311, R.314, L.315
- Chain L: F.85
- Ligands: CLA.76, CLA.77, CLA.84, BCR.100, LHG.104
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain L,- Hydrophobic interactions: B:P.310, B:P.311, B:L.315, L:F.85
CLA.109: 8 residues within 4Å:- Chain F: W.173, I.174, I.207
- Chain I: W.18, F.19, L.22
- Ligands: CLA.38, BCR.108
5 PLIP interactions:3 interactions with chain I, 2 interactions with chain F,- Hydrophobic interactions: I:F.19, I:L.22, F:W.173, F:W.173
- pi-Stacking: I:W.18
CLA.110: 8 residues within 4Å:- Chain B: F.459, W.462
- Chain F: S.151, G.152, D.153, Q.154
- Ligands: CLA.90, BCR.111
4 PLIP interactions:2 interactions with chain B, 2 interactions with chain F,- Hydrophobic interactions: B:F.459, B:W.462, F:D.153
- Hydrogen bonds: F:Q.154
CLA.115: 5 residues within 4Å:- Chain I: E.28, R.31, L.32
- Ligands: BCR.51, LMG.164
6 PLIP interactions:6 interactions with chain I,- Hydrophobic interactions: I:L.32
- Salt bridges: I:R.31
- pi-Cation interactions: I:R.31, I:R.31, I:R.31
- Metal complexes: I:E.28
CLA.118: 9 residues within 4Å:- Chain J: L.61, F.62, G.92, D.93, P.94, F.97, T.102
- Chain N: F.52
- Ligands: BCR.121
8 PLIP interactions:7 interactions with chain J, 1 interactions with chain N,- Hydrophobic interactions: J:L.61, J:F.62, J:D.93, J:P.94, J:F.97, J:F.97, J:T.102, N:F.52
CLA.119: 5 residues within 4Å:- Chain J: I.111, G.115, K.121
- Ligands: CLA.16, CLA.34
2 PLIP interactions:2 interactions with chain J,- Salt bridges: J:K.121
- pi-Cation interactions: J:K.121
CLA.120: 7 residues within 4Å:- Chain A: F.261, F.262
- Chain J: I.45, N.50, M.53, H.110
- Ligands: BCR.121
2 PLIP interactions:2 interactions with chain J,- Hydrophobic interactions: J:M.53
- pi-Cation interactions: J:H.110
CLA.122: 5 residues within 4Å:- Chain J: L.68, P.70, K.81
- Ligands: CLA.21, BCR.53
5 PLIP interactions:5 interactions with chain J,- Hydrophobic interactions: J:L.68, J:P.70, J:K.81
- Hydrogen bonds: J:K.81
- Metal complexes: J:L.68
CLA.123: 12 residues within 4Å:- Chain A: H.437, W.440
- Chain B: T.685, P.686
- Chain K: L.64, T.66, V.68
- Ligands: CLA.30, CLA.40, BCR.105, CLA.125, BCR.128
9 PLIP interactions:3 interactions with chain K, 1 interactions with chain B, 5 interactions with chain A,- Hydrophobic interactions: K:V.68, K:V.68, K:V.68, B:T.685, A:W.440
- pi-Stacking: A:H.437, A:H.437
- pi-Cation interactions: A:H.437
- Metal complexes: A:H.437
CLA.124: 9 residues within 4Å:- Chain G: Q.84, F.88
- Chain K: Y.77, N.80, R.85, E.96, L.99
- Ligands: CLA.125, BCR.128
3 PLIP interactions:3 interactions with chain K,- Hydrophobic interactions: K:Y.77, K:N.80, K:L.99
CLA.125: 13 residues within 4Å:- Chain B: L.687
- Chain K: L.78, L.81, P.82, A.83, V.97, H.101
- Ligands: CLA.40, BCR.105, CLA.123, CLA.124, CLA.126, BCR.127
4 PLIP interactions:4 interactions with chain K,- Hydrophobic interactions: K:L.78, K:A.83
- Hydrogen bonds: K:A.83
- Metal complexes: K:H.101
CLA.126: 8 residues within 4Å:- Chain K: G.107, P.108, L.111, L.199, Y.206, F.207
- Ligands: CLA.125, BCR.128
5 PLIP interactions:5 interactions with chain K,- Hydrophobic interactions: K:P.108, K:L.111, K:L.199, K:Y.206
- Hydrogen bonds: K:F.207
CLA.132: 14 residues within 4Å:- Chain L: R.94, M.97, L.98, Y.169, P.170, G.171, F.174, L.189, K.190, K.192, E.193
- Ligands: LUT.129, CLA.133, CLA.141
8 PLIP interactions:8 interactions with chain L,- Hydrophobic interactions: L:M.97, L:L.98, L:L.98, L:F.174, L:L.189, L:K.192, L:E.193
- Hydrogen bonds: L:G.171
CLA.133: 5 residues within 4Å:- Chain L: K.192, N.196
- Ligands: LUT.129, CLA.132, CLA.138
2 PLIP interactions:2 interactions with chain L,- Hydrophobic interactions: L:K.192
- Salt bridges: L:K.192
CLA.134: 15 residues within 4Å:- Chain L: L.202, V.205, G.206, V.209, Q.210, A.213, Y.214, N.222, L.223, H.226, N.234, I.235, I.238
- Ligands: LUT.129, CLA.139
12 PLIP interactions:12 interactions with chain L,- Hydrophobic interactions: L:V.209, L:V.209, L:Q.210, L:A.213, L:L.223, L:H.226, L:I.235, L:I.235, L:I.235, L:I.235, L:I.238
- Salt bridges: L:H.226
CLA.135: 17 residues within 4Å:- Chain L: L.60, P.65, G.66, D.67, F.68, G.69, F.70, F.85, K.86, S.88, E.89, R.198, M.201, L.202
- Ligands: LUT.130, CLA.136, CHL.145
12 PLIP interactions:12 interactions with chain L,- Hydrophobic interactions: L:F.70, L:F.85, L:K.86, L:E.89, L:R.198, L:M.201, L:L.202
- Hydrogen bonds: L:D.67, L:F.68, L:F.70
- Salt bridges: L:R.198
- Metal complexes: L:E.89
CLA.136: 4 residues within 4Å:- Chain L: H.92
- Ligands: LUT.130, CLA.135, CHL.142
1 PLIP interactions:1 interactions with chain L,- Metal complexes: L:H.92
CLA.137: 12 residues within 4Å:- Chain L: L.98, G.102, P.106, L.111, A.117, W.120, T.129, Y.130, L.131
- Ligands: LUT.130, BCR.131, CLA.143
3 PLIP interactions:3 interactions with chain L,- Hydrophobic interactions: L:Y.130, L:L.131
- Hydrogen bonds: L:L.131
CLA.138: 7 residues within 4Å:- Chain L: L.191, K.192, K.195, N.196
- Ligands: CLA.133, LHG.144, BCR.184
3 PLIP interactions:3 interactions with chain L,- Hydrogen bonds: L:N.196
- Salt bridges: L:K.195
- pi-Cation interactions: L:K.195
CLA.139: 6 residues within 4Å:- Chain L: H.226, W.231, N.234
- Chain O: A.138, V.142
- Ligands: CLA.134
2 PLIP interactions:1 interactions with chain L, 1 interactions with chain O,- Hydrophobic interactions: L:W.231, O:V.142
CLA.141: 13 residues within 4Å:- Chain L: Y.91, R.94, W.95, Q.157, R.158, E.161, K.167, P.170, A.173, F.174, P.176
- Ligands: LUT.129, CLA.132
5 PLIP interactions:5 interactions with chain L,- Hydrophobic interactions: L:Y.91, L:Q.157, L:E.161, L:P.170, L:F.174
CLA.143: 13 residues within 4Å:- Chain L: A.117, Q.118, W.120, A.128, W.137, I.143, I.146, E.147, I.151
- Ligands: LUT.130, BCR.131, CLA.137, CHL.140
6 PLIP interactions:6 interactions with chain L,- Hydrophobic interactions: L:Q.118, L:W.120, L:A.128, L:I.143, L:I.143, L:I.151
CLA.149: 15 residues within 4Å:- Chain M: R.97, M.100, L.101, P.182, G.183, F.187, D.188, Y.192, L.203, R.204, K.206, E.207
- Ligands: LUT.146, CLA.150, CHL.158
8 PLIP interactions:8 interactions with chain M,- Hydrophobic interactions: M:R.97, M:M.100, M:L.101, M:F.187, M:L.203
- Hydrogen bonds: M:G.183
- pi-Cation interactions: M:R.97
- Metal complexes: M:E.207
CLA.150: 6 residues within 4Å:- Chain M: K.206, N.210
- Ligands: LUT.146, CLA.149, CLA.151, CLA.155
3 PLIP interactions:3 interactions with chain M,- Hydrophobic interactions: M:K.206
- Salt bridges: M:K.206, M:K.206
CLA.151: 16 residues within 4Å:- Chain M: L.216, A.217, M.219, G.220, F.223, Q.224, T.228, N.235, L.236, H.239, A.246, T.247, I.248
- Ligands: LUT.146, CLA.150, CLA.156
6 PLIP interactions:6 interactions with chain M,- Hydrophobic interactions: M:A.217, M:F.223, M:Q.224, M:H.239, M:I.248
- Hydrogen bonds: M:I.248
CLA.152: 17 residues within 4Å:- Chain M: L.63, P.68, G.69, D.70, F.71, G.72, F.73, N.88, V.89, A.91, E.92, H.95, R.212, L.216
- Ligands: XAT.147, CLA.153, CHL.166
16 PLIP interactions:16 interactions with chain M,- Hydrophobic interactions: M:F.71, M:F.73, M:N.88, M:A.91, M:E.92, M:E.92, M:R.212, M:R.212, M:L.216, M:L.216
- Hydrogen bonds: M:F.71, M:F.73
- Salt bridges: M:R.212
- pi-Cation interactions: M:R.212, M:R.212
- Metal complexes: M:E.92
CLA.153: 8 residues within 4Å:- Chain M: W.87, N.88, A.91, H.95, M.219
- Ligands: XAT.147, CLA.152, CLA.159
3 PLIP interactions:3 interactions with chain M,- Hydrophobic interactions: M:A.91
- Hydrogen bonds: M:N.88
- Metal complexes: M:H.95
CLA.154: 9 residues within 4Å:- Chain M: L.101, A.104, G.105, I.108, T.120, P.121
- Ligands: XAT.147, BCR.148, CHL.160
3 PLIP interactions:3 interactions with chain M,- Hydrophobic interactions: M:L.101, M:A.104, M:I.108
CLA.155: 9 residues within 4Å:- Chain M: E.202, T.205, K.206, K.209, N.210
- Chain N: L.181
- Ligands: CLA.150, LHG.162, BCR.169
8 PLIP interactions:6 interactions with chain M, 2 interactions with chain N,- Hydrophobic interactions: M:K.209, M:K.209, N:L.181, N:L.181
- Hydrogen bonds: M:K.206, M:N.210
- Salt bridges: M:K.206, M:K.206
CLA.156: 10 residues within 4Å:- Chain M: L.236, H.239, P.243, T.247, F.249
- Chain N: W.144, T.149, V.152
- Ligands: LUT.146, CLA.151
5 PLIP interactions:4 interactions with chain M, 1 interactions with chain N,- Hydrophobic interactions: M:L.236, M:P.243, N:W.144
- pi-Stacking: M:H.239
- Metal complexes: M:H.239
CLA.159: 14 residues within 4Å:- Chain M: W.87, Q.90, A.91, V.94, H.95, W.98, E.142, L.143, I.146, G.147, E.150, R.153, W.154
- Ligands: CLA.153
11 PLIP interactions:11 interactions with chain M,- Hydrophobic interactions: M:W.87, M:V.94, M:L.143, M:I.146, M:E.150, M:W.154, M:W.154
- Hydrogen bonds: M:H.95
- Salt bridges: M:R.153
- pi-Cation interactions: M:R.153, M:R.153
CLA.165: 15 residues within 4Å:- Chain A: I.12, V.14, F.75, L.169, M.170, A.173, F.176, H.177, A.181, W.187
- Chain N: G.83, G.84, F.85
- Ligands: CLA.11, CLA.12
10 PLIP interactions:8 interactions with chain A, 2 interactions with chain N,- Hydrophobic interactions: A:I.12, A:V.14, A:F.75, A:L.169, A:A.173, A:F.176, A:W.187
- Metal complexes: A:H.177
- Hydrogen bonds: N:G.83, N:G.84
CLA.170: 15 residues within 4Å:- Chain N: R.100, M.103, Y.195, P.196, G.197, N.202, F.206, L.217, K.218, K.220, E.221, N.224
- Ligands: LUT.167, CLA.171, CHL.179
9 PLIP interactions:9 interactions with chain N,- Hydrophobic interactions: N:R.100, N:R.100, N:F.206, N:L.217, N:K.218, N:K.220, N:E.221, N:N.224
- Hydrogen bonds: N:G.197
CLA.171: 6 residues within 4Å:- Chain N: K.220, N.224, L.227
- Ligands: LUT.167, CLA.170, CLA.176
3 PLIP interactions:3 interactions with chain N,- Hydrophobic interactions: N:K.220, N:L.227
- Salt bridges: N:K.220
CLA.172: 15 residues within 4Å:- Chain N: L.230, A.231, L.233, G.234, L.237, Q.238, F.241, N.249, L.250, H.253, N.260, N.261, I.262
- Ligands: LUT.167, CLA.177
6 PLIP interactions:6 interactions with chain N,- Hydrophobic interactions: N:L.237, N:F.241, N:L.250, N:H.253
- Hydrogen bonds: N:N.261
- Salt bridges: N:H.253
CLA.173: 16 residues within 4Å:- Chain N: L.65, G.67, D.68, F.69, G.70, F.71, D.72, S.77, L.91, A.92, E.95, R.226, M.229, L.230
- Ligands: LUT.168, CLA.174
12 PLIP interactions:12 interactions with chain N,- Hydrophobic interactions: N:F.69, N:F.71, N:D.72, N:S.77, N:L.91, N:R.226, N:R.226, N:M.229
- Hydrogen bonds: N:F.69, N:G.70, N:F.71
- Salt bridges: N:R.226
CLA.174: 7 residues within 4Å:- Chain N: F.85, L.91, F.232, L.233
- Ligands: LUT.168, CLA.173, CLA.180
2 PLIP interactions:2 interactions with chain N,- Hydrophobic interactions: N:F.232, N:L.233
CLA.175: 11 residues within 4Å:- Chain N: M.104, G.105, V.107, G.108, P.112, T.125, A.132, Y.143
- Ligands: LUT.168, BCR.169, CLA.181
3 PLIP interactions:3 interactions with chain N,- Hydrophobic interactions: N:V.107, N:A.132, N:Y.143
CLA.176: 5 residues within 4Å:- Chain N: L.219, K.220, K.223, N.224
- Ligands: CLA.171
1 PLIP interactions:1 interactions with chain N,- Hydrophobic interactions: N:K.220
CLA.177: 5 residues within 4Å:- Chain N: H.253, P.257, N.260, I.262
- Ligands: CLA.172
5 PLIP interactions:5 interactions with chain N,- Hydrophobic interactions: N:P.257
- Hydrogen bonds: N:N.260
- pi-Stacking: N:H.253, N:H.253
- Metal complexes: N:H.253
CLA.178: 9 residues within 4Å:- Chain N: A.134, I.135, P.136, P.137, Y.148, F.151, E.154
- Ligands: LUT.168, CLA.181
8 PLIP interactions:8 interactions with chain N,- Hydrophobic interactions: N:I.135, N:I.135, N:I.135, N:P.136, N:P.137, N:F.151, N:F.151
- Metal complexes: N:A.134
CLA.180: 13 residues within 4Å:- Chain N: W.90, G.94, N.98, T.101, M.155, I.158, E.162, H.163, R.165, L.166
- Ligands: CLA.174, CLA.181, CLA.182
11 PLIP interactions:11 interactions with chain N,- Hydrophobic interactions: N:W.90, N:W.90, N:N.98, N:T.101, N:I.158, N:I.158, N:E.162, N:L.166
- Hydrogen bonds: N:N.98
- pi-Cation interactions: N:R.165, N:R.165
CLA.181: 12 residues within 4Å:- Chain N: A.132, G.133, A.134, Y.143, W.144, F.153, E.154
- Ligands: LUT.168, BCR.169, CLA.175, CLA.178, CLA.180
3 PLIP interactions:3 interactions with chain N,- Hydrophobic interactions: N:A.134, N:Y.143, N:E.154
CLA.182: 4 residues within 4Å:- Chain N: H.163, L.166
- Ligands: CHL.166, CLA.180
3 PLIP interactions:3 interactions with chain N,- Hydrophobic interactions: N:L.166
- pi-Stacking: N:H.163
- Metal complexes: N:H.163
CLA.187: 8 residues within 4Å:- Chain O: R.97, Y.184, P.185, G.186, V.205, E.209
- Ligands: LUT.185, CHL.197
3 PLIP interactions:3 interactions with chain O,- Hydrophobic interactions: O:R.97, O:V.205, O:E.209
CLA.188: 4 residues within 4Å:- Chain O: K.208, N.212
- Ligands: LUT.185, CLA.193
1 PLIP interactions:1 interactions with chain O,- Salt bridges: O:K.208
CLA.189: 15 residues within 4Å:- Chain O: V.218, A.219, G.222, V.225, Q.226, T.230, N.237, T.240, H.241, N.249, I.250, A.253
- Ligands: LUT.185, CLA.193, CLA.194
5 PLIP interactions:5 interactions with chain O,- Hydrophobic interactions: O:V.218, O:V.225, O:H.241, O:I.250
- Hydrogen bonds: O:I.250
CLA.190: 24 residues within 4Å:- Chain F: F.211, I.212
- Chain O: L.63, P.68, G.69, D.70, Y.71, G.72, F.73, D.74, L.78, G.79, L.85, Y.88, V.89, A.91, E.92, H.95, R.214, M.217, V.218
- Ligands: XAT.186, CLA.191, CLA.195
14 PLIP interactions:12 interactions with chain O, 2 interactions with chain F,- Hydrophobic interactions: O:F.73, O:D.74, O:L.78, O:Y.88, O:V.89, O:A.91, O:R.214, O:M.217, O:V.218, F:F.211, F:I.212
- Hydrogen bonds: O:Y.71, O:F.73
- Salt bridges: O:R.214
CLA.191: 7 residues within 4Å:- Chain F: V.215
- Chain O: Y.88, H.95
- Ligands: XAT.186, CLA.190, CHL.196, CLA.198
4 PLIP interactions:1 interactions with chain F, 3 interactions with chain O,- Hydrophobic interactions: F:V.215
- pi-Stacking: O:H.95, O:H.95
- Metal complexes: O:H.95
CLA.192: 9 residues within 4Å:- Chain O: A.101, G.105, T.109, L.120, P.121, T.129
- Ligands: BCR.184, XAT.186, CHL.199
1 PLIP interactions:1 interactions with chain O,- Hydrophobic interactions: O:T.109
CLA.193: 6 residues within 4Å:- Chain O: L.207, K.208, K.211, N.212
- Ligands: CLA.188, CLA.189
1 PLIP interactions:1 interactions with chain O,- Hydrogen bonds: O:N.212
CLA.194: 7 residues within 4Å:- Chain M: I.140
- Chain O: H.241, P.245, F.246, N.249
- Ligands: LUT.185, CLA.189
2 PLIP interactions:2 interactions with chain O,- Hydrophobic interactions: O:F.246
- Metal complexes: O:H.241
CLA.195: 10 residues within 4Å:- Chain M: W.148, R.152
- Chain O: T.52, W.53, P.55, Y.71, F.73
- Ligands: LMG.113, BCR.148, CLA.190
6 PLIP interactions:5 interactions with chain O, 1 interactions with chain M,- Hydrophobic interactions: O:W.53, O:P.55, O:Y.71, O:F.73
- Metal complexes: O:W.53
- Hydrogen bonds: M:R.152
CLA.198: 12 residues within 4Å:- Chain O: W.87, Q.90, A.91, V.94, H.95, F.98, M.147, G.148, E.151, R.154, Y.155
- Ligands: CLA.191
10 PLIP interactions:10 interactions with chain O,- Hydrophobic interactions: O:W.87, O:V.94, O:F.98, O:F.98, O:M.147, O:E.151, O:Y.155
- Salt bridges: O:R.154
- pi-Cation interactions: O:R.154, O:R.154
- 2 x PQN: PHYLLOQUINONE(Non-covalent)
PQN.41: 14 residues within 4Å:- Chain A: M.683, F.684, S.687, R.689, W.692, A.716, L.717, G.722
- Chain I: F.19
- Ligands: CLA.3, CLA.38, CLA.39, CLA.52, BCR.108
11 PLIP interactions:10 interactions with chain A, 1 interactions with chain I- Hydrophobic interactions: A:F.684, A:F.684, A:R.689, A:W.692, A:W.692, A:L.717, A:L.717, I:F.19
- Hydrogen bonds: A:S.687, A:L.717
- pi-Stacking: A:W.692
PQN.96: 13 residues within 4Å:- Chain B: W.22, M.662, F.663, S.666, W.667, R.668, W.671, A.699, L.700, A.705
- Ligands: CLA.93, CLA.94, BCR.102
10 PLIP interactions:10 interactions with chain B- Hydrophobic interactions: B:W.22, B:W.22, B:R.668, B:W.671, B:L.700, B:L.700, B:A.705
- Hydrogen bonds: B:S.666, B:L.700
- pi-Stacking: B:W.671
- 5 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
LHG.43: 15 residues within 4Å:- Chain A: N.48, A.51, D.52, F.397, R.570, S.718, I.720, Q.721, A.724, T.728, I.735
- Ligands: CLA.6, CLA.8, CLA.29, CLA.39
8 PLIP interactions:8 interactions with chain A- Hydrophobic interactions: A:F.397, A:T.728, A:I.735
- Hydrogen bonds: A:N.48, A:S.718, A:Q.721
- Salt bridges: A:R.570, A:R.570
LHG.44: 11 residues within 4Å:- Chain A: K.327, G.328, P.329, F.330, T.331, G.334, H.335
- Ligands: CLA.23, CLA.30, CLA.42, BCR.47
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:G.328, A:G.328, A:F.330, A:T.331
LHG.104: 7 residues within 4Å:- Chain B: P.310, P.311, G.312, R.314
- Ligands: CLA.77, CLA.95, BCR.100
3 PLIP interactions:2 interactions with chain B, 1 interactions with chain L- Hydrogen bonds: B:P.311, L:L.75
- Salt bridges: B:R.314
LHG.144: 7 residues within 4Å:- Chain L: K.195, R.198, L.199
- Chain O: F.141, L.145
- Ligands: CLA.138, CHL.145
5 PLIP interactions:2 interactions with chain L, 3 interactions with chain O- Hydrophobic interactions: L:R.198, O:F.141, O:F.141, O:L.145
- Salt bridges: L:K.195
LHG.162: 8 residues within 4Å:- Chain M: P.51, K.209, R.212, L.216
- Chain N: Y.179
- Ligands: CLA.155, CHL.166, BCR.169
2 PLIP interactions:2 interactions with chain M- Hydrophobic interactions: M:R.212, M:L.216
- 25 x BCR: BETA-CAROTENE(Non-covalent)
BCR.45: 10 residues within 4Å:- Chain A: G.162, A.163, F.166, S.209
- Ligands: CLA.5, CLA.13, CLA.14, CLA.15, BCR.53, BCR.121
Ligand excluded by PLIPBCR.46: 5 residues within 4Å:- Chain A: G.206
- Ligands: CLA.5, CLA.13, CLA.18, CLA.28
Ligand excluded by PLIPBCR.47: 10 residues within 4Å:- Chain A: L.342, S.351, A.406, F.409
- Ligands: CLA.20, CLA.23, CLA.24, CLA.42, LHG.44, BCR.48
Ligand excluded by PLIPBCR.48: 10 residues within 4Å:- Chain A: A.355, S.359, L.548, V.552
- Ligands: CLA.20, CLA.23, CLA.25, CLA.26, CLA.33, BCR.47
Ligand excluded by PLIPBCR.49: 14 residues within 4Å:- Chain A: F.670, G.673, A.674, F.676, V.677, L.732, I.735, W.739
- Ligands: CLA.2, CLA.27, CLA.39, CLA.86, CLA.87, BCR.116
Ligand excluded by PLIPBCR.51: 11 residues within 4Å:- Chain A: W.116, I.118
- Chain I: Y.7, P.12, T.16, R.31
- Ligands: CLA.3, CLA.8, CLA.9, CLA.115, BCR.116
Ligand excluded by PLIPBCR.53: 16 residues within 4Å:- Chain A: F.261, F.262, I.300, L.303, H.307, I.315
- Chain J: P.70, A.104, A.107, V.108
- Ligands: CLA.14, CLA.19, CLA.21, BCR.45, BCR.121, CLA.122
Ligand excluded by PLIPBCR.97: 6 residues within 4Å:- Chain B: L.225, L.285, H.289
- Ligands: CLA.69, CLA.74, CLA.75
Ligand excluded by PLIPBCR.98: 9 residues within 4Å:- Chain B: I.57, F.58, G.181, L.182
- Ligands: CLA.60, CLA.67, CLA.69, CLA.82, BCR.99
Ligand excluded by PLIPBCR.99: 8 residues within 4Å:- Chain B: T.61, L.65, G.138, L.142, W.209
- Ligands: CLA.68, CLA.69, BCR.98
Ligand excluded by PLIPBCR.100: 6 residues within 4Å:- Chain B: M.411
- Ligands: CLA.76, CLA.77, CLA.95, BCR.101, LHG.104
Ligand excluded by PLIPBCR.101: 13 residues within 4Å:- Chain B: F.332, G.335, A.339, A.386, F.387, G.390, F.393, F.394
- Ligands: CLA.79, CLA.80, CLA.88, CLA.92, BCR.100
Ligand excluded by PLIPBCR.102: 13 residues within 4Å:- Chain A: I.443
- Chain B: W.648, M.649, F.652, I.675
- Ligands: CLA.31, CLA.40, CLA.54, CLA.57, CLA.62, CLA.63, CLA.94, PQN.96
Ligand excluded by PLIPBCR.105: 9 residues within 4Å:- Chain B: T.685, P.686, L.687
- Ligands: CLA.31, CLA.32, CLA.64, BCR.114, CLA.123, CLA.125
Ligand excluded by PLIPBCR.108: 12 residues within 4Å:- Chain A: I.696
- Chain B: F.431
- Chain F: P.163, L.166, F.167, I.170
- Ligands: CLA.2, CLA.38, PQN.41, CLA.86, CLA.87, CLA.109
Ligand excluded by PLIPBCR.111: 11 residues within 4Å:- Chain A: L.706
- Chain F: I.161, G.175, W.176, R.179, W.213, A.217
- Ligands: CLA.85, CLA.86, CLA.91, CLA.110
Ligand excluded by PLIPBCR.114: 9 residues within 4Å:- Chain H: V.14, G.15, P.19
- Ligands: CLA.31, CLA.32, CLA.61, CLA.62, CLA.64, BCR.105
Ligand excluded by PLIPBCR.116: 11 residues within 4Å:- Chain A: I.80
- Chain I: A.23, L.26, N.30
- Ligands: CLA.7, CLA.8, CLA.9, CLA.27, BCR.49, BCR.51, CLA.87
Ligand excluded by PLIPBCR.121: 13 residues within 4Å:- Chain A: F.261
- Chain J: T.102, L.103, G.106, A.107, H.110, I.111, V.114
- Ligands: CLA.19, BCR.45, BCR.53, CLA.118, CLA.120
Ligand excluded by PLIPBCR.127: 13 residues within 4Å:- Chain B: I.25, I.691
- Chain H: M.23, L.26, F.27
- Chain K: L.136, C.139, L.140
- Ligands: CLA.31, CLA.40, CLA.58, CLA.93, CLA.125
Ligand excluded by PLIPBCR.128: 10 residues within 4Å:- Chain G: F.87, F.88
- Chain K: Y.77, L.99, A.100, Y.103, W.194
- Ligands: CLA.123, CLA.124, CLA.126
Ligand excluded by PLIPBCR.131: 4 residues within 4Å:- Chain L: A.150, I.151
- Ligands: CLA.137, CLA.143
Ligand excluded by PLIPBCR.148: 7 residues within 4Å:- Chain M: L.145, I.146, W.148
- Ligands: CLA.154, CHL.158, CHL.160, CLA.195
Ligand excluded by PLIPBCR.169: 10 residues within 4Å:- Chain N: L.157, I.158, F.160, F.180
- Ligands: CLA.155, LHG.162, CHL.166, CLA.175, CHL.179, CLA.181
Ligand excluded by PLIPBCR.184: 9 residues within 4Å:- Chain O: L.146, M.147, F.149, V.150
- Ligands: CLA.138, CHL.145, CLA.192, CHL.197, CHL.199
Ligand excluded by PLIP- 3 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
SF4.50: 9 residues within 4Å:- Chain A: C.573, G.575, P.576, C.582, R.723
- Chain B: C.559, G.561, P.562, C.568
4 PLIP interactions:2 interactions with chain B, 2 interactions with chain A,- Metal complexes: B:C.559, B:C.568, A:C.573, A:C.582
SF4.106: 10 residues within 4Å:- Chain C: A.20, C.21, P.22, T.23, V.25, C.48, V.49, G.50, C.51, C.54
5 PLIP interactions:5 interactions with chain C,- Metal complexes: C:C.21, C:C.48, C:C.51, C:C.51, C:C.54
SF4.107: 9 residues within 4Å:- Chain C: C.11, I.12, C.14, T.15, C.17, M.28, A.57, C.58, V.65
4 PLIP interactions:4 interactions with chain C,- Metal complexes: C:C.11, C:C.14, C:C.17, C:C.58
- 2 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
DGD.103: 17 residues within 4Å:- Chain B: S.9, R.19, W.22, F.23, A.26, T.27, S.33, S.556, W.573, Q.704, L.707, S.714, V.715, I.718
- Ligands: CLA.60, CLA.83, CLA.94
9 PLIP interactions:9 interactions with chain B- Hydrophobic interactions: B:W.22, B:F.23, B:Q.704, B:L.707, B:V.715, B:I.718
- Hydrogen bonds: B:S.9, B:R.19, B:S.33
DGD.117: 24 residues within 4Å:- Chain B: F.428, L.429, H.432, H.521
- Chain F: R.128, N.132, K.135, F.136, L.148, E.159, F.160, P.163, L.166
- Chain I: I.29, F.33, P.34, A.36, L.37, S.38, F.39, P.40, F.41
- Ligands: CLA.87, CLA.91
16 PLIP interactions:3 interactions with chain B, 8 interactions with chain I, 5 interactions with chain F- Hydrophobic interactions: B:F.428, B:L.429, B:H.432, I:I.29, I:I.29, I:F.33, I:F.33, I:A.36, F:L.148, F:F.160, F:P.163, F:L.166
- Hydrogen bonds: I:P.34, I:A.36, I:P.40, F:R.128
- 5 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
LMG.112: 10 residues within 4Å:- Chain F: R.194, I.198, D.199, V.200, E.201
- Chain I: R.2, K.5, T.6, S.9
- Ligands: LMG.163
6 PLIP interactions:4 interactions with chain F, 2 interactions with chain I- Hydrogen bonds: F:R.194, F:R.194, F:I.198, F:V.200, I:S.9
- Salt bridges: I:K.5
LMG.113: 7 residues within 4Å:- Chain F: R.205, P.208, R.209
- Chain O: P.60, P.75
- Ligands: XAT.186, CLA.195
4 PLIP interactions:3 interactions with chain F, 1 interactions with chain O- Hydrophobic interactions: F:P.208, O:P.75
- Hydrogen bonds: F:R.205, F:R.209
LMG.163: 3 residues within 4Å:- Chain M: E.83, W.87
- Ligands: LMG.112
1 PLIP interactions:1 interactions with chain I- Hydrogen bonds: I:K.5
LMG.164: 4 residues within 4Å:- Chain M: T.135, F.139
- Ligands: CLA.115, CHL.157
2 PLIP interactions:2 interactions with chain M- Hydrophobic interactions: M:F.139, M:F.139
LMG.183: 2 residues within 4Å:- Chain F: I.222
- Chain O: Y.155
No protein-ligand interaction detected (PLIP)- 6 x LUT: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
LUT.129: 12 residues within 4Å:- Chain L: M.97, F.174, D.175, P.176, L.177, L.199, P.219, L.223
- Ligands: CLA.132, CLA.133, CLA.134, CLA.141
6 PLIP interactions:6 interactions with chain L- Hydrophobic interactions: L:M.97, L:L.199, L:L.223
- Hydrogen bonds: L:L.177, L:G.178, L:P.219
LUT.130: 15 residues within 4Å:- Chain L: D.71, P.72, L.73, L.75, H.92, C.99, W.114, Q.118, F.204, V.205
- Ligands: CLA.135, CLA.136, CLA.137, CHL.140, CLA.143
9 PLIP interactions:9 interactions with chain L- Hydrophobic interactions: L:L.73, L:L.75, L:F.204, L:F.204, L:F.204, L:V.205
- Hydrogen bonds: L:D.71, L:L.73, L:W.114
LUT.146: 14 residues within 4Å:- Chain M: M.100, A.103, F.107, P.189, Y.192, A.217, Q.224, P.232, N.235, L.236
- Ligands: CLA.149, CLA.150, CLA.151, CLA.156
9 PLIP interactions:9 interactions with chain M- Hydrophobic interactions: M:M.100, M:A.103, M:F.107, M:F.107, M:A.217
- Hydrogen bonds: M:D.188, M:Q.224, M:P.232, M:L.236
LUT.167: 17 residues within 4Å:- Chain N: M.103, V.106, I.110, F.201, N.202, P.203, N.224, L.227, A.228, A.231, M.235, Q.238, P.246, L.250
- Ligands: CLA.170, CLA.171, CLA.172
8 PLIP interactions:8 interactions with chain N- Hydrophobic interactions: N:M.103, N:V.106, N:I.110, N:A.228, N:A.231, N:M.235, N:L.250
- Hydrogen bonds: N:Q.238
LUT.168: 20 residues within 4Å:- Chain N: F.71, D.72, P.73, L.74, N.98, T.101, A.102, G.105, G.108, M.109, W.129, A.132, A.134, M.229, F.232
- Ligands: CLA.173, CLA.174, CLA.175, CLA.178, CLA.181
6 PLIP interactions:6 interactions with chain N- Hydrophobic interactions: N:F.71, N:L.74, N:A.134, N:M.229, N:F.232
- Hydrogen bonds: N:P.73
LUT.185: 14 residues within 4Å:- Chain O: M.100, V.103, N.191, M.193, A.216, A.219, F.223, Q.226, P.234, L.238
- Ligands: CLA.187, CLA.188, CLA.189, CLA.194
8 PLIP interactions:8 interactions with chain O- Hydrophobic interactions: O:M.100, O:A.216, O:A.219, O:F.223
- Hydrogen bonds: O:M.193, O:Q.226, O:P.234, O:L.238
- 12 x CHL: CHLOROPHYLL B(Non-covalent)
CHL.140: 7 residues within 4Å:- Chain L: W.114, Q.118, A.121, A.122, E.147
- Ligands: LUT.130, CLA.143
2 PLIP interactions:2 interactions with chain L,- Hydrophobic interactions: L:W.114, L:A.121
CHL.142: 11 residues within 4Å:- Chain L: E.87, S.88, Y.91, H.92, I.151, A.152, E.155, Q.156, R.158, T.159
- Ligands: CLA.136
6 PLIP interactions:6 interactions with chain L,- Hydrophobic interactions: L:I.151, L:A.152, L:Q.156, L:T.159
- Hydrogen bonds: L:H.92
- Salt bridges: L:R.158
CHL.145: 12 residues within 4Å:- Chain L: E.49, W.50, F.51, P.52, F.68
- Chain O: F.149, T.152, K.153, M.156
- Ligands: CLA.135, LHG.144, BCR.184
7 PLIP interactions:4 interactions with chain L, 3 interactions with chain O,- Hydrophobic interactions: L:W.50, L:F.51, O:F.149
- pi-Stacking: L:W.50
- Metal complexes: L:W.50
- Hydrogen bonds: O:K.153
- Salt bridges: O:K.153
CHL.157: 12 residues within 4Å:- Chain M: W.123, Y.124, T.125, G.127, E.128, F.139, E.142, W.222, E.226
- Ligands: XAT.147, CHL.160, LMG.164
7 PLIP interactions:7 interactions with chain M,- Hydrophobic interactions: M:W.123, M:Y.124, M:Y.124, M:F.139, M:W.222
- Hydrogen bonds: M:G.127, M:E.128
CHL.158: 14 residues within 4Å:- Chain M: R.97, W.98, W.148, A.149, R.152, R.153, D.156, G.180, P.182, W.186, F.187
- Ligands: BCR.148, CLA.149, CHL.161
5 PLIP interactions:5 interactions with chain M,- Hydrophobic interactions: M:R.153, M:D.156, M:W.186, M:F.187
- Hydrogen bonds: M:R.152
CHL.160: 10 residues within 4Å:- Chain M: A.126, G.127, Y.131, F.132, L.138, E.142, L.145
- Ligands: BCR.148, CLA.154, CHL.157
4 PLIP interactions:4 interactions with chain M,- Hydrophobic interactions: M:Y.131, M:L.138, M:L.138, M:E.142
CHL.161: 13 residues within 4Å:- Chain M: W.148, R.152, V.163, N.164, T.165, D.166, P.167, F.169, N.172, L.174, L.185, W.186
- Ligands: CHL.158
7 PLIP interactions:7 interactions with chain M,- Hydrophobic interactions: M:D.166, M:F.169, M:N.172, M:L.174, M:L.174
- pi-Stacking: M:W.186
- Metal complexes: M:D.166
CHL.166: 16 residues within 4Å:- Chain M: P.51, W.53, F.54, P.55, F.71
- Chain N: G.159, F.160, H.163, R.164, Q.167, Q.178, F.180
- Ligands: CLA.152, LHG.162, BCR.169, CLA.182
7 PLIP interactions:3 interactions with chain N, 4 interactions with chain M,- Hydrophobic interactions: N:F.180, M:P.51, M:W.53, M:P.55
- Hydrogen bonds: N:R.164
- Salt bridges: N:H.163
- Metal complexes: M:W.53
CHL.179: 15 residues within 4Å:- Chain N: Y.93, R.100, T.101, A.161, R.164, R.165, D.168, M.175, L.187, P.193, A.194, P.196, F.201
- Ligands: BCR.169, CLA.170
5 PLIP interactions:5 interactions with chain N,- Hydrophobic interactions: N:A.161, N:R.165, N:D.168, N:P.196, N:F.201
CHL.196: 9 residues within 4Å:- Chain O: W.123, F.124, E.125, G.127, A.128, F.140
- Ligands: XAT.186, CLA.191, CHL.199
3 PLIP interactions:3 interactions with chain O,- Hydrophobic interactions: O:F.140
- Hydrogen bonds: O:G.127, O:A.128
CHL.197: 12 residues within 4Å:- Chain O: R.97, F.98, V.150, K.153, R.154, D.157, Q.164, S.176, P.185, F.190
- Ligands: BCR.184, CLA.187
7 PLIP interactions:7 interactions with chain O,- Hydrophobic interactions: O:V.150, O:V.150, O:R.154, O:D.157, O:P.185
- Hydrogen bonds: O:R.97, O:S.176
CHL.199: 7 residues within 4Å:- Chain O: A.126, L.139, V.142
- Ligands: BCR.184, XAT.186, CLA.192, CHL.196
1 PLIP interactions:1 interactions with chain O,- Hydrophobic interactions: O:L.139
- 2 x XAT: (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
XAT.147: 18 residues within 4Å:- Chain M: F.73, D.74, P.75, W.76, W.98, A.99, G.102, G.105, I.106, W.123, A.126, M.215, V.218, M.219
- Ligands: CLA.152, CLA.153, CLA.154, CHL.157
7 PLIP interactions:7 interactions with chain M- Hydrophobic interactions: M:W.76, M:W.98, M:A.99, M:I.106, M:W.123, M:M.215
- Hydrogen bonds: M:W.76
XAT.186: 18 residues within 4Å:- Chain O: F.73, D.74, P.75, L.76, H.95, F.98, A.99, G.102, W.123, A.126, M.217, M.220
- Ligands: LMG.113, CLA.190, CLA.191, CLA.192, CHL.196, CHL.199
6 PLIP interactions:6 interactions with chain O- Hydrophobic interactions: O:F.73, O:L.76, O:A.99, O:W.123, O:M.217
- Hydrogen bonds: O:L.76
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Shen, L. et al., Architecture of the chloroplast PSI-NDH supercomplex in Hordeum vulgare. Nature (2022)
- Release Date
- 2021-12-22
- Peptides
- Photosystem I P700 chlorophyll a apoprotein A1: A
Photosystem I P700 chlorophyll a apoprotein A2: B
Photosystem I iron-sulfur center: C
Photosystem I reaction center subunit II, chloroplastic: D
Photosystem I reaction center subunit IV, chloroplastic: E
Photosystem I reaction center subunit III, chloroplastic: F
Photosystem I reaction center subunit VI, chloroplastic: G
Photosystem I reaction center subunit VIII: H
Photosystem I reaction center subunit IX: I
Photosystem I reaction center subunit psaK, chloroplastic: J
Photosystem I reaction center subunit XI, chloroplastic: K
Chlorophyll a-b binding protein Lhca1: L
Chlorophyll a-b binding protein, chloroplastic: M
Chlorophyll a-b binding protein, chloroplastic: N
Chlorophyll a-b binding protein Lhca5: O - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
HH
II
JJ
KK
LL
1M
2N
3O
5 - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 1 x CL0: CHLOROPHYLL A ISOMER(Non-covalent)
- 136 x CLA: CHLOROPHYLL A(Non-covalent)
- 2 x PQN: PHYLLOQUINONE(Non-covalent)
- 5 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
- 25 x BCR: BETA-CAROTENE(Non-covalent)
- 3 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 2 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
- 5 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
- 6 x LUT: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
- 12 x CHL: CHLOROPHYLL B(Non-covalent)
- 2 x XAT: (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Shen, L. et al., Architecture of the chloroplast PSI-NDH supercomplex in Hordeum vulgare. Nature (2022)
- Release Date
- 2021-12-22
- Peptides
- Photosystem I P700 chlorophyll a apoprotein A1: A
Photosystem I P700 chlorophyll a apoprotein A2: B
Photosystem I iron-sulfur center: C
Photosystem I reaction center subunit II, chloroplastic: D
Photosystem I reaction center subunit IV, chloroplastic: E
Photosystem I reaction center subunit III, chloroplastic: F
Photosystem I reaction center subunit VI, chloroplastic: G
Photosystem I reaction center subunit VIII: H
Photosystem I reaction center subunit IX: I
Photosystem I reaction center subunit psaK, chloroplastic: J
Photosystem I reaction center subunit XI, chloroplastic: K
Chlorophyll a-b binding protein Lhca1: L
Chlorophyll a-b binding protein, chloroplastic: M
Chlorophyll a-b binding protein, chloroplastic: N
Chlorophyll a-b binding protein Lhca5: O - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
HH
II
JJ
KK
LL
1M
2N
3O
5 - Membrane
-
We predict this structure to be a membrane protein.