SMTL ID : 7fw1.1

Crystal Structure of human FABP4 in complex with 2-cyclopentyl-4-(4-fluorophenyl)-6-[1-(methoxymethyl)cyclopentyl]-3-methyl-5-(1H-tetrazol-5-yl)pyridine, i.e. SMILES c1(c(nc(c(c1c1ccc(cc1)F)C1=NN=NN1)C1(CCCC1)COC)C1CCCC1)C with IC50=0.0153077 microM

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.26 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: S.17, E.18, N.19, F.20, D.21 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.17, A:S.17, A:N.19, A:F.20, A:D.21 Water bridges: A:D.22 SO4.2: 3 residues within 4Å: Chain A: R.112, D.115, R.134 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.112, A:R.112 Salt bridges: A:R.112, A:R.134

1 x K7C: (5P)-2-cyclopentyl-4-(4-fluorophenyl)-6-[1-(methoxymethyl)cyclopentyl]-3-methyl-5-(1H-tetrazol-5-yl)pyridine(Non-covalent)

K7C.3: 25 residues within 4Å: Chain A: F.20, Y.23, M.24, V.27, V.29, A.37, A.40, P.42, M.44, S.57, S.59, F.61, K.62, T.78, A.79, D.80, R.82, Q.99, T.106, I.108, R.110, V.119, C.121, R.130, Y.132 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:F.20, A:Y.23, A:V.27, A:V.29, A:A.40, A:P.42, A:F.61, A:A.79, A:V.119 Hydrogen bonds: A:R.130, A:R.130, A:Y.132 Water bridges: A:S.57, A:Q.99 pi-Stacking: A:F.20

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Obst, U. et al., Crystal Structure of a human FABP4 complex. To be published

Release Date

2023-06-14

Peptides

Fatty acid-binding protein, adipocyte: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fatty acid-binding protein, adipocyte

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