SMTL ID : 7fwl.1

Crystal Structure of human FABP4 in complex with 5-[(3,4-dichlorophenyl)methyl]-1,1-dioxo-1,2,5-thiadiazolidin-3-one

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.12 Å

Oligo State

monomer

Ligands

1 x O6Q: 5-[(3,4-dichlorophenyl)methyl]-1lambda~6~,2,5-thiadiazolidine-1,1,3-trione(Non-covalent)

O6Q.1: 12 residues within 4Å: Chain A: F.20, M.24, V.29, A.37, S.57, A.79, D.80, R.82, I.108, R.110, R.130, Y.132 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:A.79 Hydrogen bonds: A:R.110, A:R.130, A:Y.132 Water bridges: A:S.57, A:Y.132, A:Y.132 pi-Stacking: A:F.20

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: S.17, E.18, N.19, F.20, D.21 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:S.17, A:S.17, A:F.20, A:D.21 Water bridges: A:E.18, A:N.19, A:D.22 SO4.3: 4 residues within 4Å: Chain A: D.6, R.112, D.115, R.134 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:D.6, A:D.115 Water bridges: A:R.112, A:R.112, A:D.115 Salt bridges: A:R.112, A:R.134 SO4.4: 4 residues within 4Å: Chain A: V.29, G.30, T.33, D.80 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:G.30, A:T.33, A:T.33 Water bridges: A:G.28, A:T.33, A:D.80, A:D.80

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Obst, U. et al., Crystal Structure of a human FABP4 complex. To be published

Release Date

2023-06-14

Peptides

Fatty acid-binding protein, adipocyte: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fatty acid-binding protein, adipocyte

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