SMTL ID : 7fy0.1

Crystal Structure of human FABP5 in complex with (2R)-1-[(3,5-dichloro-2-phenylphenyl)carbamoyl]pyrrolidine-2-carboxylic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.34 Å

Oligo State

monomer

Ligands

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.1: 3 residues within 4Å: Chain A: T.111, E.122, V.124 No protein-ligand interaction detected (PLIP)

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: S.19, K.20, G.21, F.22, D.23 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.19, A:F.22, A:D.23 Water bridges: A:G.21, A:G.21, A:E.24 SO4.3: 5 residues within 4Å: Chain A: T.66, E.78, T.80, A.81 Ligands: UOF.5 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.66, A:E.78, A:A.81 Water bridges: A:T.59 SO4.4: 3 residues within 4Å: Chain A: D.23, K.27, R.36 4 PLIP interactions: 4 interactions with chain A Water bridges: A:D.23, A:R.36 Salt bridges: A:K.27, A:R.36

1 x UOF: 1-[(4,6-dichloro[1,1'-biphenyl]-2-yl)carbamoyl]-D-proline(Non-covalent)

UOF.5: 15 residues within 4Å: Chain A: F.22, M.26, L.29, M.38, G.39, A.42, A.81, D.82, R.84, I.110, V.121, C.123, R.132, Y.134 Ligands: SO4.3 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.29, A:A.81, A:I.110 Hydrogen bonds: A:R.132 Water bridges: A:R.112, A:R.112, A:R.112, A:Y.134 Salt bridges: A:R.132

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Obst, U. et al., Crystal Structure of a human FABP5 complex. To be published

Release Date

2023-06-14

Peptides

Fatty acid-binding protein 5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fatty acid-binding protein 5

Related Entries With Identical Sequence