SMTL ID : 7fyb.1

Crystal Structure of human FABP4 in complex with rac-(1R,2S,4R)-2-[(3-chlorobenzoyl)amino]-4-phenoxycyclohexane-1-carboxylic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.05 Å

Oligo State

monomer

Ligands

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.1: 7 residues within 4Å: Chain A: H.3, C.5, V.48, G.50, D.51, I.53, L.70 1 PLIP interactions: 1 interactions with chain A pi-Cation interactions: A:H.3

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: S.17, E.18, N.19, F.20, D.21 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:S.17, A:S.17, A:F.20, A:D.21 Water bridges: A:E.18, A:N.19, A:D.22 SO4.3: 3 residues within 4Å: Chain A: R.112, D.115, R.134 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:D.115 Water bridges: A:R.112, A:R.112, A:R.134, A:R.134 Salt bridges: A:R.112, A:R.134

1 x VIY: (1R,2S,4R)-2-(3-chlorobenzamido)-4-phenoxycyclohexane-1-carboxylic acid(Non-covalent)

VIY.4: 24 residues within 4Å: Chain A: F.20, Y.23, M.24, V.27, V.29, T.33, A.37, A.40, P.42, S.57, S.59, F.61, K.62, N.63, T.64, A.79, D.80, R.82, I.108, R.110, V.119, C.121, R.130, Y.132 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:F.20, A:F.20, A:V.29, A:P.42, A:A.79, A:D.80 Hydrogen bonds: A:T.64, A:Y.132 Water bridges: A:R.82 Salt bridges: A:R.130 Halogen bonds: A:A.37

1 x FMT: FORMIC ACID(Non-functional Binders)

FMT.5: 6 residues within 4Å: Chain A: V.98, S.105, T.106, T.107, V.122, M.123 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.105, A:S.105, A:T.107, A:T.107 Water bridges: A:K.124

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Obst, U. et al., Crystal Structure of a human FABP4 complex. To be published

Release Date

2023-06-14

Peptides

Fatty acid-binding protein, adipocyte: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fatty acid-binding protein, adipocyte

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