SMTL ID : 7fyd.1

Crystal Structure of human FABP5 in complex with 6-chloro-4-phenyl-2-propan-2-ylquinoline-3-carboxylic acid, i.e. SMILES c1(ccc2c(c1)c(c1ccccc1)c(c(n2)C(C)C)C(=O)O)Cl with IC50=2.6 microM

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

monomer

Ligands

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.1: 4 residues within 4Å: Chain A: T.109, T.111, E.122, V.124 No protein-ligand interaction detected (PLIP)

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: S.19, K.20, G.21, F.22, D.23 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.19, A:G.21, A:F.22, A:D.23 Water bridges: A:E.24 SO4.3: 4 residues within 4Å: Chain A: D.23, K.27, I.33, R.36 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:K.27, A:R.36

1 x VLQ: 6-chloro-4-phenyl-2-(propan-2-yl)quinoline-3-carboxylic acid(Non-covalent)

VLQ.4: 11 residues within 4Å: Chain A: F.22, L.29, L.35, T.59, K.64, A.81, D.82, I.110, C.123, R.132, Y.134 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:F.22, A:F.22, A:L.29, A:T.59, A:K.64, A:A.81, A:I.110 Hydrogen bonds: A:Y.134 Water bridges: A:T.59, A:R.112 Salt bridges: A:R.132 pi-Stacking: A:F.22, A:F.22

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Obst, U. et al., Crystal Structure of a human FABP5 complex. To be published

Release Date

2023-06-14

Peptides

Fatty acid-binding protein 5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fatty acid-binding protein 5

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