SMTL ID : 7g01.1

Crystal Structure of human FABP5 in complex with 6-chloro-4-phenyl-2-piperidin-1-ylquinoline-3-carboxylic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.17 Å

Oligo State

monomer

Ligands

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.1: 5 residues within 4Å: Chain A: T.109, T.111, E.122, C.123, V.124 No protein-ligand interaction detected (PLIP)

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: S.19, K.20, G.21, F.22, D.23 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:S.19, A:S.19, A:F.22, A:D.23 Water bridges: A:G.21, A:G.21, A:G.21, A:G.21

2 x 5M7: 6-chloranyl-4-phenyl-2-piperidin-1-yl-quinoline-3-carboxylic acid(Non-covalent)

5M7.3: 16 residues within 4Å: Chain A: F.22, M.26, L.35, A.42, P.44, T.59, S.61, K.64, A.81, D.82, I.110, R.112, V.121, C.123, R.132, Y.134 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:F.22, A:A.42, A:P.44, A:T.59, A:A.81, A:D.82, A:I.110, A:I.110, A:V.121 Hydrogen bonds: A:T.59 Salt bridges: A:R.132 5M7.4: 4 residues within 4Å: Chain A: A.34, K.37, M.38, M.41 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:K.37, A:K.37 Salt bridges: A:K.37

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.5: 3 residues within 4Å: Chain A: H.100, T.109, T.111 1 PLIP interactions: 1 interactions with chain A Water bridges: A:T.109

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Obst, U. et al., Crystal Structure of a human FABP5 complex. To be published

Release Date

2023-06-14

Peptides

Fatty acid-binding protein 5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fatty acid-binding protein 5

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