SMTL ID : 7g09.1

Crystal Structure of human FABP4 in complex with 8-(3-bromophenyl)-7,9-dioxa-1-thia-3-azaspiro[4.5]decane-2,4-dione

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.05 Å

Oligo State

monomer

Ligands

1 x WJQ: (5s,8s)-8-(3-bromophenyl)-7,9-dioxa-1-thia-3-azaspiro[4.5]decane-2,4-dione(Non-covalent)

WJQ.1: 19 residues within 4Å: Chain A: L.14, F.20, Y.23, M.24, V.27, V.29, T.33, A.37, F.61, A.79, D.80, R.82, I.108, R.110, V.119, C.121, R.130, Y.132 Ligands: DMS.3 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:V.29, A:D.80 Hydrogen bonds: A:R.110, A:R.130, A:R.130, A:Y.132, A:Y.132 Water bridges: A:S.57, A:A.79, A:R.82, A:R.110 pi-Stacking: A:F.20

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: R.112, D.115, R.134 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.115 Water bridges: A:R.112, A:R.112 Salt bridges: A:R.112, A:R.134 SO4.5: 5 residues within 4Å: Chain A: S.17, E.18, N.19, F.20, D.21 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:S.17, A:S.17, A:F.20, A:D.21 Water bridges: A:E.18, A:N.19, A:D.22

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.3: 10 residues within 4Å: Chain A: F.20, A.37, A.40, P.42, S.57, S.59, F.61, K.62, R.130 Ligands: WJQ.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.59 Water bridges: A:S.57

1 x FMT: FORMIC ACID(Non-functional Binders)

FMT.4: 7 residues within 4Å: Chain A: V.98, S.105, T.106, T.107, V.122, M.123, K.124 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.105, A:S.105, A:T.107, A:T.107 Water bridges: A:K.124

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Obst, U. et al., Crystal Structure of a human FABP4 complex. To be published

Release Date

2023-06-14

Peptides

Fatty acid-binding protein, adipocyte: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fatty acid-binding protein, adipocyte

Related Entries With Identical Sequence