SMTL ID : 7g2o.1

Crystal Structure of rat Autotaxin in complex with [2-cyclopropyl-6-(oxan-4-ylmethoxy)pyridin-4-yl]-[5-(3-hydroxy-5,7-dihydro-4H-[1,2]oxazolo[5,4-c]pyridine-6-carbonyl)-1,3,4,6-tetrahydropyrrolo[3,4-c]pyrrol-2-yl]methanone, i.e. SMILES N1(C(=O)N2CC3=C(C2)CN(C3)C(=O)c2cc(OCC3CCOCC3)nc(C3CC3)c2)CC2=C(CC1)C(=NO2)O with IC50=0.00526079 microM

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.06 Å
Oligo State
monomer
Ligands
1 x NAG- NAG- BMA- MAN- MAN- MAN- MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x XW9: [5-{2-cyclopropyl-6-[(oxan-4-yl)methoxy]pyridine-4-carbonyl}-3,4,5,6-tetrahydropyrrolo[3,4-c]pyrrol-2(1H)-yl](3-hydroxy-4,7-dihydro[1,2]oxazolo[5,4-c]pyridin-6(5H)-yl)methanone(Non-covalent)
1 x K: POTASSIUM ION(Non-covalent)
1 x ACT: ACETATE ION(Non-functional Binders)
1 x CL: CHLORIDE ION(Non-functional Binders)
1 x ZN: ZINC ION(Non-covalent)
1 x NA: SODIUM ION(Non-functional Binders)
1 x CA: CALCIUM ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Hunziker, D. et al., Crystal Structure of a rat Autotaxin complex. To be published
Release Date
2024-12-18
Peptides
Isoform 2 of Ectonucleotide pyrophosphatase/phosphodiesterase family member 2: A
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A

Isoform 2 of Ectonucleotide pyrophosphatase/phosphodiesterase family member 2

Related Entries With Identical Sequence

5s9l.1 | 5s9m.1 | 5s9n.1 | 7g2e.1 | 7g2f.1 | 7g2g.1 | 7g2h.1 | 7g2i.1 | 7g2j.1 | 7g2k.1 | 7g2l.1 | 7g2m.1 | 7g2n.1 | 7g2p.1 | 7g2q.1 | 7g2r.1 | 7g2s.1 | 7g2t.1 | 7g2u.1 | 7g2v.1 | 7g2w.1 | 7g2x.1 | 7g2y.1 | 7g2z.1 | 7g30.1 | 7g31.1 | 7g32.1 | 7g33.1 | 7g34.1 | 7g35.1  more...