SMTL ID : 7g4d.1

Crystal Structure of rat Autotaxin in complex with rac-(E)-1-[rac-(1R,2S,6R,7S)-9-(1H-benzotriazole-5-carbonyl)-4,9-diazatricyclo[5.3.0.02,6]decan-4-yl]-3-[4-(trifluoromethoxy)phenyl]prop-2-en-1-one, i.e. SMILES N1(C[C@H]2[C@@H](C1)[C@H]1[C@@H]2CN(C1)C(=O)c1ccc2c(c1)N=NN2)C(=O)/C=C/c1ccc(cc1)OC(F)(F)F with IC50=0.00827722 microM

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.18 Å
Oligo State
monomer
Ligands
1 x NAG- NAG- BMA- MAN- MAN- MAN- MAN- MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x Y9C: (2E)-1-[(3aR,3bS,6aR,6bS)-5-(1H-benzotriazole-5-carbonyl)octahydrocyclobuta[1,2-c:3,4-c']dipyrrol-2(1H)-yl]-3-[4-(trifluoromethoxy)phenyl]prop-2-en-1-one(Non-covalent)
1 x ZN: ZINC ION(Non-covalent)
1 x CA: CALCIUM ION(Non-covalent)
4 x CL: CHLORIDE ION(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Hunziker, D. et al., Crystal Structure of a rat Autotaxin complex. To be published
Release Date
2024-12-18
Peptides
Isoform 2 of Ectonucleotide pyrophosphatase/phosphodiesterase family member 2: A
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A

Isoform 2 of Ectonucleotide pyrophosphatase/phosphodiesterase family member 2

Related Entries With Identical Sequence

5s9l.1 | 5s9m.1 | 5s9n.1 | 7g2e.1 | 7g2f.1 | 7g2g.1 | 7g2h.1 | 7g2i.1 | 7g2j.1 | 7g2k.1 | 7g2l.1 | 7g2m.1 | 7g2n.1 | 7g2o.1 | 7g2p.1 | 7g2q.1 | 7g2r.1 | 7g2s.1 | 7g2t.1 | 7g2u.1 | 7g2v.1 | 7g2w.1 | 7g2x.1 | 7g2y.1 | 7g2z.1 | 7g30.1 | 7g31.1 | 7g32.1 | 7g33.1 | 7g34.1  more...