SMTL ID : 7hgb.2 (2 other biounits)

PanDDA analysis group deposition -- Crystal structure of HRP-2 PWWP domain in complex with Z33297786

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.52 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: R.75, K.76, G.77, F.78, N.79, E.80 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.77, A:N.79, A:E.80 Water bridges: A:F.78, A:N.79 SO4.2: 3 residues within 4Å: Chain A: K.15, K.17, G.18 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.18 Salt bridges: A:K.15

1 x 01: 2-methoxy-N-[(4-methylphenyl)methyl]acetamide

01.3: 7 residues within 4Å: Chain A: M.16, Y.19, W.22, F.45, T.48, E.50, T.51 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:E.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vantieghem, T. et al., Rational fragment-based design of compounds targeting the PWWP domain of the HRP family. Eur.J.Med.Chem. (2024)

Release Date

2024-11-06

Peptides

Hepatoma-derived growth factor-related protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Hepatoma-derived growth factor-related protein 2

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