SMTL ID : 7i9o.1

Group deposition of ZIKV NS2B-NS3 protease in complex with inhibitors from ASAP Discovery Consortium -- Crystal Structure of ZIKV NS2B-NS3 protease in complex with ASAP-0022538-001

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.96 Å

Oligo State

hetero-1-1-mer

Ligands

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.1: 3 residues within 4Å: Chain B: K.45, G.46, A.47 No protein-ligand interaction detected (PLIP)

1 x 01: N-[3-(aminomethyl)phenyl]-2-(propan-2-yl)-1H-1,3-benzimidazole-4-carboxamide

01.2: 12 residues within 4Å: Chain A: G.39, D.40 Chain B: H.42, D.66, Y.121, A.123, S.126, Y.141, G.142, N.143, V.146, Y.152 10 PLIP interactions: 9 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:H.42, B:V.146, B:Y.152 Hydrogen bonds: B:G.142, A:G.39 Water bridges: B:Y.121, B:S.126 pi-Stacking: B:H.42, B:Y.152, B:Y.152

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ni, X. et al., Group deposition of ZIKV NS2B-NS3 protease in complex with inhibitors from ASAP Discovery Consortium. To Be Published

Release Date

2025-04-23

Peptides

Serine protease subunit NS2B: A
Serine protease NS3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine protease subunit NS2B

Serine protease NS3

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