SMTL ID : 7i9q.1

Group deposition of ZIKV NS2B-NS3 protease in complex with inhibitors from ASAP Discovery Consortium -- Crystal Structure of ZIKV NS2B-NS3 protease in complex with ASAP-0028904-001

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.02 Å

Oligo State

hetero-1-1-mer

Ligands

2 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.1: 3 residues within 4Å: Chain B: K.45, G.46, A.47 No protein-ligand interaction detected (PLIP) DMS.3: 4 residues within 4Å: Chain B: D.111, G.112, D.113, I.114 1 PLIP interactions: 1 interactions with chain B Water bridges: B:T.109

1 x 01: (2R)-(6-chloro-1H-indazol-4-yl)[(2,3-dihydro-1H-isoindol-5-yl)amino]acetonitrile

01.2: 13 residues within 4Å: Chain A: S.38, G.39, D.40 Chain B: H.42, D.66, Y.121, P.122, A.123, S.126, Y.141, G.142, N.143, Y.152 7 PLIP interactions: 6 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:H.42 Hydrogen bonds: B:S.126, A:S.38 Water bridges: B:G.142, B:N.143 pi-Stacking: B:H.42, B:Y.152

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ni, X. et al., Group deposition of ZIKV NS2B-NS3 protease in complex with inhibitors from ASAP Discovery Consortium. To Be Published

Release Date

2025-04-23

Peptides

Serine protease subunit NS2B: A
Serine protease NS3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine protease subunit NS2B

Serine protease NS3

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