SMTL ID : 7lf7.2 (1 other biounit)

Fab 6D12 bound to ApoL1 NTD

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.03 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 3 residues within 4Å: Chain B: Y.32, F.55, A.59 No protein-ligand interaction detected (PLIP) GOL.2: 3 residues within 4Å: Chain B: N.41, L.45, A.51 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.41

1 x EOH: ETHANOL(Non-functional Binders)

EOH.3: 6 residues within 4Å: Chain C: Q.37, K.45, L.47, I.58, P.59, F.62 1 PLIP interactions: 1 interactions with chain C Water bridges: C:Q.37

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ultsch, M. et al., Structures of the ApoL1 and ApoL2 N-terminal domains reveal a non-classical four-helix bundle motif. Commun Biol (2021)

Release Date

2021-08-04

Peptides

Fab 6D12 heavy chain: A
Apolipoprotein L1: B
Fab 6D12 light chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
K

C
L

Fab 6D12 heavy chain

Apolipoprotein L1

Fab 6D12 light chain

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