SMTL ID : 7lfa.2 (1 other biounit)

Fab 3B6 bound to ApoL1 NTD

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.86 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 11 residues within 4Å: Chain B: A.143, G.168, H.170, F.172, V.187, T.189 Chain C: S.117, T.119, L.138, S.140, D.141 6 PLIP interactions: 2 interactions with chain B, 4 interactions with chain C Hydrogen bonds: B:T.189, C:T.119, C:T.119, C:S.140, C:S.140 Water bridges: B:T.189

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 2 residues within 4Å: Chain C: S.195, E.206 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ultsch, M. et al., Structures of the ApoL1 and ApoL2 N-terminal domains reveal a non-classical four-helix bundle motif. Commun Biol (2021)

Release Date

2021-08-04

Peptides

Apolipoprotein L1: A
Fab 3B6 heavy chain: B
Fab 3B6 light chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
H

C
L

Apolipoprotein L1

Fab 3B6 heavy chain

Fab 3B6 light chain

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