SMTL ID : 7lq1.1

HUMAN PI3KDELTA IN COMPLEX WITH COMPOUND 28

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.96 Å

Oligo State

hetero-1-1-mer

Ligands

1 x YA7: N-(5-(6-(2-((2S,6R)-2,6-dimethylmorpholino)pyridin-4-yl)-1-oxoisoindolin-4-yl)-2-methoxypyridin-3-yl)methanesulfonamide(Non-covalent)

YA7.1: 18 residues within 4Å: Chain A: M.752, S.754, P.758, W.760, I.777, K.779, L.784, D.787, Y.813, I.825, E.826, V.827, V.828, D.832, T.833, M.900, I.910, D.911 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:W.760, A:I.777, A:T.833, A:I.910 Hydrogen bonds: A:S.754, A:K.779, A:K.779, A:Y.813, A:V.828, A:D.911

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fradera, X. et al., Discovery of a new series of PI3K-delta inhibitors from Virtual Screening. Bioorg.Med.Chem.Lett. (2021)

Release Date

2022-02-16

Peptides

Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform: A
Phosphatidylinositol 3-kinase regulatory subunit alpha: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform

Phosphatidylinositol 3-kinase regulatory subunit alpha

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