SMTL ID : 7msg.1

The crystal structure of LIGHT in complex with HVEM and CD160

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.50 Å

Oligo State

hetero-3-3-mer

Ligands

3 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 5 residues within 4Å: Chain D: N.2, T.4, W.21, I.65, L.170 1 PLIP interactions: 1 interactions with chain D Hydrophobic interactions: D:I.65 NAG-NAG.3: 5 residues within 4Å: Chain E: N.2, T.4, W.21, I.65, L.170 1 PLIP interactions: 1 interactions with chain E Hydrophobic interactions: E:I.65 NAG-NAG.5: 5 residues within 4Å: Chain F: N.2, T.4, W.21, I.65, L.170 1 PLIP interactions: 1 interactions with chain F Hydrophobic interactions: F:I.65

3 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.2: 4 residues within 4Å: Chain D: R.206, A.207, S.208, N.210 No protein-ligand interaction detected (PLIP) NAG-NAG-BMA.4: 4 residues within 4Å: Chain E: R.206, A.207, S.208, N.210 No protein-ligand interaction detected (PLIP) NAG-NAG-BMA.6: 4 residues within 4Å: Chain F: R.206, A.207, S.208, N.210 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, W. et al., HVEM structures and mutants reveal distinct functions of binding to LIGHT and BTLA/CD160. J.Exp.Med. (2021)

Release Date

2021-10-27

Peptides

Tumor necrosis factor ligand superfamily member 14, membrane form: ABC
CD160 antigen, soluble form,Tumor necrosis factor receptor superfamily member 14: DEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

Tumor necrosis factor ligand superfamily member 14, membrane form

CD160 antigen, soluble form,Tumor necrosis factor receptor superfamily member 14

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