- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAG- NAG- MAN- MAN- MAN- MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
- 8 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
NAG.2: 4 residues within 4Å:- Chain A: D.2, F.3, N.5, N.154
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:F.3, A:N.5
- Water bridges: A:N.5
NAG.3: 2 residues within 4Å:- Chain A: N.65, W.357
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:N.65, A:W.357
NAG.6: 4 residues within 4Å:- Chain B: D.2, F.3, N.5, N.154
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:F.3, B:N.5
- Water bridges: B:N.5
NAG.7: 2 residues within 4Å:- Chain B: N.65, W.357
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:N.65, B:W.357
NAG.10: 4 residues within 4Å:- Chain C: D.2, F.3, N.5, N.154
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:F.3, C:N.5
- Water bridges: C:N.5
NAG.11: 2 residues within 4Å:- Chain C: N.65, W.357
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:N.65, C:W.357
NAG.14: 4 residues within 4Å:- Chain D: D.2, F.3, N.5, N.154
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:F.3, D:N.5
- Water bridges: D:N.5
NAG.15: 2 residues within 4Å:- Chain D: N.65, W.357
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:N.65, D:W.357
- 4 x CA: CALCIUM ION(Non-covalent)
CA.4: 4 residues within 4Å:- Chain A: D.213, G.217, D.244, N.266
6 PLIP interactions:4 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:D.213, A:G.217, A:D.244, A:N.266, H2O.1, H2O.4
CA.8: 4 residues within 4Å:- Chain B: D.213, G.217, D.244, N.266
6 PLIP interactions:4 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:D.213, B:G.217, B:D.244, B:N.266, H2O.9, H2O.13
CA.12: 4 residues within 4Å:- Chain C: D.213, G.217, D.244, N.266
6 PLIP interactions:4 interactions with chain C, 2 Ligand-Water interactions- Metal complexes: C:D.213, C:G.217, C:D.244, C:N.266, H2O.18, H2O.21
CA.16: 4 residues within 4Å:- Chain D: D.213, G.217, D.244, N.266
6 PLIP interactions:4 interactions with chain D, 2 Ligand-Water interactions- Metal complexes: D:D.213, D:G.217, D:D.244, D:N.266, H2O.26, H2O.30
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Varghese, J.N. et al., Three-dimensional structure of the complex of 4-guanidino-Neu5Ac2en and influenza virus neuraminidase. Protein Sci. (1995)
- Release Date
- 1996-04-03
- Peptides
- NEURAMINIDASE N9: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAG- NAG- MAN- MAN- MAN- MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
- 8 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 4 x CA: CALCIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Varghese, J.N. et al., Three-dimensional structure of the complex of 4-guanidino-Neu5Ac2en and influenza virus neuraminidase. Protein Sci. (1995)
- Release Date
- 1996-04-03
- Peptides
- NEURAMINIDASE N9: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A