SMTL ID : 7opm.1

Phosphorylated ERK2 in complex with ORF45

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.45 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x 08G: 1-[4-(hydroxymethyl)-1H-pyrazolo[4,3-c]pyridin-6-yl]-3-[(1S)-1-phenylethyl]urea(Non-covalent)

08G.1: 15 residues within 4Å: Chain A: I.35, E.37, G.38, G.41, V.43, A.56, K.58, Q.109, D.110, L.111, M.112, N.158, L.160, C.170, D.171 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.43, A:D.171 Hydrogen bonds: A:K.58, A:K.58, A:Q.109, A:D.110, A:M.112, A:D.171

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 8 residues within 4Å: Chain A: Q.21, E.37, G.38, A.39, Y.40, G.41, M.42, S.61 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.21, A:S.61, A:S.61 GOL.3: 6 residues within 4Å: Chain A: D.24, R.95, A.96, Q.101, K.103, D.104 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:A.96, A:K.103, A:D.104, A:D.104 Water bridges: A:D.24 GOL.4: 4 residues within 4Å: Chain A: T.30, N.31, Y.47, R.54 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.30, A:R.54

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Alexa, A. et al., A non-catalytic herpesviral protein reconfigures ERK-RSK signaling by targeting kinase docking systems in the host. Nat Commun (2022)

Release Date

2022-02-02

Peptides

Mitogen-activated protein kinase 1: A
synthetic ERK2 inhibitor peptide: B
Protein ORF45: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Mitogen-activated protein kinase 1

synthetic ERK2 inhibitor peptide

Protein ORF45