SMTL ID : 7ori.1

La Crosse virus polymerase at replication late-elongation stage

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain D: C.2077, H.2182, I.2186, D.2191, H.2195 5 PLIP interactions: 5 interactions with chain D Metal complexes: D:C.2077, D:H.2182, D:D.2191, D:D.2191, D:H.2195

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain D: A.1072, D.1073, D.1201 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:D.1073, D:D.1073, D:D.1201, D:D.1201

1 x POP: PYROPHOSPHATE 2-(Non-covalent)

POP.3: 9 residues within 4Å: Chain C: U.30 Chain D: R.958, M.1074, S.1075, K.1076, W.1077, Q.1158, D.1200, K.1241 6 PLIP interactions: 6 interactions with chain D Hydrogen bonds: D:K.1076, D:W.1077, D:Q.1158 Salt bridges: D:R.958, D:K.1076, D:K.1241

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Arragain, B. et al., Structural snapshots of La Crosse virus polymerase reveal the mechanisms underlying Peribunyaviridae replication and transcription. Nat Commun (2022)

Release Date

2022-02-16

Peptides

La Crosse virus polymerase: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

D
A

La Crosse virus polymerase

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