SMTL ID : 7oro.1

La Crosse virus polymerase at replication early-elongation stage

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x A- G- U- A- G- U- G- U- A: RNA (5'-R(P*AP*GP*UP*AP*GP*UP*GP*UP*A)-3')(Non-covalent)

A-G-U-A-G-U-G-U-A.1: 35 residues within 4Å: Chain C: G.16, U.17, A.18, C.19, A.20, C.21, U.22, A.23, C.24, U.25 Chain D: Y.750, K.754, T.838, S.840, K.953, R.958, H.1198, S.1199, D.1200, V.1252, S.1253, R.1267, F.1268, T.1271, D.1275, C.1276, A.1277, V.1485, K.1487, R.1501, R.1506, F.1507, S.1510, Q.1706, Y.1709 Protein-ligand interaction information (PLIP) not available

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 6 residues within 4Å: Chain D: C.2077, G.2079, H.2182, I.2186, D.2191, H.2195 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.2077, D:H.2182, D:D.2191, D:H.2195

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 4 residues within 4Å: Chain D: A.1072, D.1201, E.1250, F.1251 2 PLIP interactions: 2 interactions with chain D Metal complexes: D:D.1201, D:D.1201

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Arragain, B. et al., Structural snapshots of La Crosse virus polymerase reveal the mechanisms underlying Peribunyaviridae replication and transcription. Nat Commun (2022)

Release Date

2022-02-16

Peptides

La Crosse virus polymerase: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

D
A

La Crosse virus polymerase

Related Entries With Identical Sequence