SMTL ID : 7orj.1

La Crosse virus polymerase at transcription capped RNA cleavage stage

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: C.2077, G.2079, S.2080, H.2182, D.2191, H.2195 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.2077, A:H.2182, A:D.2191, A:H.2195

1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.2: 18 residues within 4Å: Chain A: R.958, I.960, D.1073, M.1074, S.1075, K.1076, W.1077, S.1078, W.1156, Q.1158, G.1159, N.1162, S.1199, D.1200, N.1238, K.1241 Chain C: U.22, A.23 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:R.958, A:D.1073, A:K.1076, A:W.1077, A:S.1078, A:G.1159, A:S.1199, A:D.1200, A:N.1238, A:N.1238 Salt bridges: A:R.958, A:K.1076, A:K.1241, A:K.1241, A:K.1241

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Arragain, B. et al., Structural snapshots of La Crosse virus polymerase reveal the mechanisms underlying Peribunyaviridae replication and transcription. Nat Commun (2022)

Release Date

2022-02-16

Peptides

RNA-directed RNA polymerase L: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RNA-directed RNA polymerase L

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