SMTL ID : 7t9g.1

Structure of VcINDY-Na+

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

4 x NA: SODIUM ION(Non-functional Binders)

NA.1: 5 residues within 4Å: Chain A: S.133, S.137, N.138, G.180, G.186 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.138 NA.2: 6 residues within 4Å: Chain A: T.360, A.363, S.364, N.365, A.401, A.407 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.365, A:T.408 NA.3: 5 residues within 4Å: Chain B: S.133, S.137, N.138, G.180, G.186 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:G.186 NA.4: 6 residues within 4Å: Chain B: T.360, A.363, S.364, N.365, A.401, A.407 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:A.363, B:N.365

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sauer, D.B. et al., Structural basis of ion - substrate coupling in the Na + -dependent dicarboxylate transporter VcINDY. Nat Commun (2022)

Release Date

2022-05-25

Peptides

DASS family sodium-coupled anion symporter: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
Y

Membrane

We predict this structure to be a membrane protein.
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DASS family sodium-coupled anion symporter

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