SMTL ID : 7w0h.1

Deactive state CI from Q10 dataset, Subclass 2

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-2-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer

Ligands

6 x SF4: IRON/SULFUR CLUSTER(Non-covalent)(Covalent)

SF4.1: 11 residues within 4Å: Chain A: I.178, P.196, C.352, G.353, Q.354, C.355, C.358, T.396, I.397, C.398, G.401 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.352, A:C.355, A:C.358, A:C.398 SF4.3: 13 residues within 4Å: Chain B: C.77, I.78, A.79, C.80, K.81, C.83, I.94, Y.109, C.126, P.127, V.128, A.130, I.131 4 PLIP interactions: 4 interactions with chain B, Metal complexes: B:C.77, B:C.80, B:C.83, B:C.126 SF4.4: 12 residues within 4Å: Chain B: H.65, C.87, P.88, I.92, C.116, I.117, Y.118, C.119, G.120, F.121, C.122, E.133 5 PLIP interactions: 5 interactions with chain B, Salt bridges: B:E.133 Metal complexes: B:C.87, B:C.116, B:C.119, B:C.122 SF4.5: 9 residues within 4Å: Chain C: C.31, C.32, S.95, C.96, C.126, P.127 Chain P: R.85, R.105, H.190 6 PLIP interactions: 5 interactions with chain C, 1 interactions with chain P, Metal complexes: C:C.31, C:C.31, C:C.32, C:C.96, C:C.126, P:H.190 SF4.10: 10 residues within 4Å: Chain L: H.96, D.99, C.100, C.103, Q.105, C.109, Q.112, V.200, G.201 Chain P: M.342 4 PLIP interactions: 4 interactions with chain L, Metal complexes: L:H.96, L:C.100, L:C.103, L:C.109 SF4.11: 11 residues within 4Å: Chain L: C.148, I.149, Q.150, C.151, T.152, R.153, C.154, V.178, C.198, V.200, L.203 4 PLIP interactions: 4 interactions with chain L, Metal complexes: L:C.148, L:C.151, L:C.154, L:C.198

1 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)

FMN.2: 18 residues within 4Å: Chain A: G.60, R.61, G.62, K.71, N.89, D.91, E.92, G.93, Y.177, I.178, G.180, E.181, E.182, V.215, A.216, N.217, A.399, L.400 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:Y.177, A:Y.177, A:I.178, A:E.181, A:A.399, A:L.400 Hydrogen bonds: A:G.62, A:E.92, A:G.93, A:N.217, A:T.220 Salt bridges: A:K.71

9 x PEE: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine(Non-covalent)

PEE.6: 16 residues within 4Å: Chain 7: L.24, L.27, N.28, A.29 Chain C: L.10, V.14, R.18, L.150, W.153, R.156 Ligands: PLX.7, UQ.38 Chain f: I.49, A.52, L.53, F.56 13 PLIP interactions: 8 interactions with chain C, 4 interactions with chain f, 1 interactions with chain 7 Hydrophobic interactions: C:L.10, C:L.10, C:V.14, C:L.150, C:W.153, C:W.153, f:I.49, f:A.52, f:L.53, f:F.56, 7:L.27 Salt bridges: C:R.18, C:R.156 PEE.16: 22 residues within 4Å: Chain B: T.24, L.25, W.27, L.30, L.34 Chain P: R.233, N.237 Chain S: V.17, I.24 Chain U: I.38, L.41 Chain f: P.180, M.183, F.186, I.187, T.238, I.273, Y.277, L.288, S.292, F.293, L.296 18 PLIP interactions: 4 interactions with chain B, 3 interactions with chain P, 7 interactions with chain f, 3 interactions with chain S, 1 interactions with chain U Hydrophobic interactions: B:W.27, B:W.27, B:L.30, B:L.34, f:M.183, f:F.186, f:F.186, f:T.238, f:I.273, f:Y.277, f:F.293, S:I.24, S:I.24, U:L.41 Hydrogen bonds: P:N.237, S:E.15 Salt bridges: P:R.233, P:R.233 PEE.18: 12 residues within 4Å: Chain 7: A.99, A.103, W.106 Chain S: L.8, A.11, L.18, S.21, F.22, G.25 Chain f: K.291, P.295, M.302 11 PLIP interactions: 2 interactions with chain f, 4 interactions with chain S, 5 interactions with chain 7 Hydrophobic interactions: f:P.295, S:A.11, S:F.22, S:F.22, S:F.22, 7:A.99, 7:A.103, 7:W.106, 7:W.106 Salt bridges: f:K.291 Hydrogen bonds: 7:W.106 PEE.20: 18 residues within 4Å: Chain 7: I.3, M.4, L.7 Chain Q: A.39 Chain U: F.138, I.139, W.140, Y.141, T.142 Chain a: I.34, L.45, S.50, L.54, F.57 Chain f: M.98, N.99, F.104, L.111 13 PLIP interactions: 4 interactions with chain f, 3 interactions with chain 7, 1 interactions with chain Q, 5 interactions with chain a Hydrophobic interactions: f:F.104, f:F.104, f:L.111, 7:I.3, 7:I.3, 7:L.7, a:I.34, a:L.54, a:F.57, a:F.57 Hydrogen bonds: f:N.99, Q:A.39, a:S.50 PEE.24: 14 residues within 4Å: Chain 9: W.66, H.67, W.68, L.78, F.138, I.142 Chain Z: I.80, Y.84, H.88 Ligands: CDL.22, PLX.35, CDL.36 Chain e: P.371, L.449 9 PLIP interactions: 2 interactions with chain e, 4 interactions with chain Z, 3 interactions with chain 9 Hydrophobic interactions: e:P.371, e:L.449, Z:I.80, Z:Y.84, Z:Y.84, 9:W.66, 9:F.138, 9:I.142 Salt bridges: Z:K.92 PEE.27: 16 residues within 4Å: Chain 6: L.170, M.284, L.287, L.288, Y.291, R.295 Chain 9: L.562, T.566, S.567, Q.570, M.571 Chain P: Q.13, Y.20 Chain e: N.144, Y.152, A.155 9 PLIP interactions: 6 interactions with chain 6, 2 interactions with chain 9, 1 interactions with chain e Hydrophobic interactions: 6:L.170, 6:L.288, 6:Y.291, 6:Y.291, 9:L.562, 9:Q.570, e:Y.152 Hydrogen bonds: 6:Y.291 Salt bridges: 6:R.295 PEE.29: 9 residues within 4Å: Chain 9: F.568, I.569, K.572, M.573 Chain T: G.108, I.109, A.112, Y.116 Ligands: CDL.19 4 PLIP interactions: 4 interactions with chain 9 Hydrophobic interactions: 9:F.568, 9:I.569, 9:K.572 Salt bridges: 9:K.572 PEE.31: 13 residues within 4Å: Chain 0: N.85, R.86 Chain 9: T.166, Q.170, L.173, Y.174, G.228, L.229, M.533, H.534, T.538, N.541 Chain e: L.405 7 PLIP interactions: 6 interactions with chain 9, 1 interactions with chain e Hydrophobic interactions: 9:L.173, 9:H.534, 9:T.538, e:L.405 Hydrogen bonds: 9:Q.170 Salt bridges: 9:H.534, 9:H.534 PEE.33: 16 residues within 4Å: Chain 6: I.276, I.277 Chain 9: L.562 Chain T: L.123, E.130, W.132 Ligands: PLX.34 Chain e: P.159, Y.166, S.191, F.194, M.195, L.197, A.198, M.201, V.205 11 PLIP interactions: 2 interactions with chain T, 7 interactions with chain e, 1 interactions with chain 6, 1 interactions with chain 9 Hydrophobic interactions: T:L.123, T:W.132, e:P.159, e:F.194, e:F.194, e:L.197, e:A.198, e:V.205, 6:I.276, 9:L.562 Hydrogen bonds: e:S.191

6 x PLX: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL(Non-covalent)

PLX.7: 11 residues within 4Å: Chain C: K.9, L.13, W.16, R.19, K.145 Chain M: R.28, N.30, W.74 Ligands: PEE.6 Chain f: I.49, L.53 8 PLIP interactions: 7 interactions with chain C, 1 interactions with chain f Hydrophobic interactions: C:K.9, C:L.13, C:W.16, f:L.53 Hydrogen bonds: C:R.19 Salt bridges: C:R.19, C:K.145, C:K.145 PLX.23: 9 residues within 4Å: Chain 2: F.46 Chain Y: R.74, T.75, F.76, D.78 Chain b: C.23 Chain e: K.3, L.36, S.40 5 PLIP interactions: 2 interactions with chain Y, 2 interactions with chain e, 1 interactions with chain 2 Hydrophobic interactions: Y:F.76, 2:F.46 Salt bridges: Y:D.78, e:K.3, e:K.3 PLX.25: 23 residues within 4Å: Chain 4: S.4, R.9, P.11, L.12, F.14, M.35, F.72, L.76 Chain 5: P.1, F.2, F.3 Chain 6: I.202, L.203, L.206, I.207, M.261, L.332, V.336, M.339, A.342, L.343, L.346, N.347 14 PLIP interactions: 5 interactions with chain 4, 9 interactions with chain 6 Hydrophobic interactions: 4:F.72, 4:F.72, 4:L.76, 6:L.203, 6:L.206, 6:I.207, 6:L.332, 6:L.332, 6:V.336, 6:M.339, 6:A.342, 6:N.347 Salt bridges: 4:R.9, 4:R.79 PLX.28: 10 residues within 4Å: Chain 5: L.13 Chain 7: N.83, T.86, M.90 Chain a: S.148, Y.149, T.151, W.152, I.155, W.159 8 PLIP interactions: 1 interactions with chain 7, 6 interactions with chain a, 1 interactions with chain 5 Hydrogen bonds: 7:T.86 Hydrophobic interactions: a:T.151, a:W.152, a:I.155, a:I.155, a:W.159, 5:L.13 pi-Cation interactions: a:Y.149 PLX.34: 11 residues within 4Å: Chain T: L.119, A.122 Ligands: CDL.32, PEE.33 Chain e: N.188, S.189, W.190, Y.256, P.260, F.261, L.264 8 PLIP interactions: 6 interactions with chain e, 2 interactions with chain T Hydrophobic interactions: e:W.190, e:Y.256, e:P.260, e:F.261, e:L.264, T:L.119, T:A.122 pi-Cation interactions: e:W.190 PLX.35: 17 residues within 4Å: Chain 2: S.56, V.59, A.60, Y.61 Chain 9: M.20, N.23, W.66 Ligands: CDL.22, PEE.24, CDL.36 Chain e: L.39, V.67, W.71, I.317, L.446, L.447, N.450 8 PLIP interactions: 6 interactions with chain e, 1 interactions with chain 2, 1 interactions with chain 9 Hydrophobic interactions: e:L.39, e:W.71, e:I.317, e:L.447, e:N.450, 2:V.59, 9:N.23 Hydrogen bonds: e:N.450

2 x 8Q1: S-[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] dodecanethioate(Covalent)

8Q1.8: 17 residues within 4Å: Chain D: K.16, V.19, W.26, V.50, M.53, F.54, M.55, N.57, A.58, V.60, V.66, L.69, G.73, F.93 Chain F: D.43, S.44, L.45 10 PLIP interactions: 8 interactions with chain D, 2 interactions with chain F Hydrophobic interactions: D:W.26, D:M.53, D:F.54, D:V.66, D:F.93 Hydrogen bonds: D:K.16, D:A.58, F:S.44, F:L.45 Salt bridges: D:K.16 8Q1.21: 20 residues within 4Å: Chain 9: F.513 Chain V: D.43, S.44, L.45 Chain d: H.11, Q.12, V.15, A.22, M.43, R.46, F.47, H.50, K.51, A.59, L.62, L.63, A.66, E.69, F.70, G.73 7 PLIP interactions: 4 interactions with chain d, 1 interactions with chain 9, 2 interactions with chain V Hydrophobic interactions: d:V.15, d:A.22, d:F.47, d:K.51, 9:F.513 Hydrogen bonds: V:S.44, V:L.45

1 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NDP.9: 23 residues within 4Å: Chain C: R.156 Chain I: G.25, T.27, G.28, F.29, L.30, R.50, C.51, W.73, L.94, V.95, G.96, R.97, F.104, V.109, F.110, I.132, H.134, Y.145, K.149, P.168, I.171, R.177 21 PLIP interactions: 20 interactions with chain I, 1 interactions with chain C Hydrophobic interactions: I:P.168, I:I.171 Hydrogen bonds: I:T.27, I:T.27, I:T.27, I:T.27, I:F.29, I:L.30, I:R.50, I:L.94, I:G.96, I:K.149, I:I.171, I:R.177 Salt bridges: I:R.50, I:R.97, I:R.97, I:R.177, I:R.177, C:R.156 pi-Cation interactions: I:R.50

2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)

FES.12: 9 residues within 4Å: Chain L: R.34, C.36, Y.37, G.45, N.46, C.47, R.48, C.50, C.64 4 PLIP interactions: 4 interactions with chain L, Metal complexes: L:C.36, L:C.47, L:C.50, L:C.64 FES.15: 9 residues within 4Å: Chain N: C.103, T.105, P.107, C.108, C.144, L.145, G.146, A.147, C.148 4 PLIP interactions: 4 interactions with chain N, Metal complexes: N:C.103, N:C.108, N:C.144, N:C.148

1 x MG: MAGNESIUM ION(Non-covalent)

MG.13: 5 residues within 4Å: Chain L: Q.105, I.195, C.198, V.200, L.203 2 PLIP interactions: 2 interactions with chain L Metal complexes: L:I.195, L:C.198

9 x CDL: CARDIOLIPIN(Non-covalent)

CDL.14: 14 residues within 4Å: Chain H: S.2, A.3, T.4, I.7 Chain M: L.2, V.5, L.6, R.8, Q.12, Y.22 Chain Q: M.1, W.2, F.3 Chain f: Y.43 4 PLIP interactions: 3 interactions with chain M, 1 interactions with chain H Hydrophobic interactions: M:L.6 Hydrogen bonds: M:Q.12, H:T.4 Salt bridges: M:R.8 CDL.19: 22 residues within 4Å: Chain 6: P.110, L.153, M.157, L.160, I.164 Chain 9: M.576, Q.580, T.594, I.597 Chain T: T.31, I.34, V.35, Y.38, S.39, L.42, K.43, R.57, Y.58, S.62, I.65, F.69 Ligands: PEE.29 19 PLIP interactions: 4 interactions with chain 6, 13 interactions with chain T, 2 interactions with chain 9 Hydrophobic interactions: 6:P.110, 6:L.153, 6:L.160, 6:I.164, T:T.31, T:I.34, T:Y.38, T:Y.38, T:Y.38, T:L.42, T:I.65, T:F.69, T:F.69, 9:I.597 Hydrogen bonds: T:Y.58, 9:Q.580 Salt bridges: T:K.43, T:K.43, T:R.57 CDL.22: 24 residues within 4Å: Chain 1: P.43, A.47, R.48 Chain 2: S.56, T.57, A.60, Y.61 Chain 9: T.13, N.65, F.80 Chain Y: L.27, A.34, I.37, T.38, N.41, H.66 Chain Z: W.79, I.80, I.81, Y.83, H.88 Ligands: PEE.24, PLX.35, CDL.36 19 PLIP interactions: 7 interactions with chain Y, 5 interactions with chain Z, 3 interactions with chain 2, 1 interactions with chain 9, 3 interactions with chain 1 Hydrophobic interactions: Y:L.27, Y:A.34, Y:I.37, Z:W.79, Z:I.80, Z:I.81, Z:Y.83, 2:T.57, 2:A.60, 9:F.80, 1:P.43, 1:A.47 Hydrogen bonds: Y:T.38, Y:N.41, Y:N.41, 2:Y.61, 1:R.48 Salt bridges: Y:H.66, Z:H.88 CDL.26: 17 residues within 4Å: Chain 6: Y.6, T.7, I.10, M.11, K.46, Q.125, L.128, L.129, T.132, W.133, I.209, L.213, M.217, M.323, L.325 Chain i: P.5, V.9 12 PLIP interactions: 12 interactions with chain 6 Hydrophobic interactions: 6:Y.6, 6:L.128, 6:L.129, 6:W.133, 6:I.209, 6:L.213, 6:L.325 Hydrogen bonds: 6:Y.6, 6:K.46, 6:Q.125 Salt bridges: 6:K.46, 6:K.321 CDL.30: 20 residues within 4Å: Chain 0: G.105, F.106, F.109 Chain 9: L.286, L.290, I.293, L.410, L.413, I.414, S.417, L.418, A.421, R.425, V.493, M.496, L.504, K.514, S.517, T.519, Y.520 19 PLIP interactions: 16 interactions with chain 9, 3 interactions with chain 0 Hydrophobic interactions: 9:L.286, 9:L.290, 9:I.293, 9:L.410, 9:L.413, 9:I.414, 9:L.418, 9:A.421, 9:V.493, 9:L.504, 9:T.519, 0:F.106, 0:F.106, 0:F.109 Hydrogen bonds: 9:S.517, 9:S.517, 9:Y.520 Salt bridges: 9:R.425, 9:K.514 CDL.32: 16 residues within 4Å: Chain 9: L.553, W.557, L.558 Chain T: Y.107, G.108 Ligands: PLX.34 Chain c: P.81, T.82, P.83, S.86, G.89, A.90, G.93, I.94, L.97 Chain e: L.264 11 PLIP interactions: 1 interactions with chain e, 4 interactions with chain c, 4 interactions with chain 9, 2 interactions with chain T Hydrophobic interactions: e:L.264, c:A.90, c:I.94, c:I.94, c:L.97, 9:L.553, 9:W.557, 9:W.557, 9:L.558 Hydrogen bonds: T:Y.107, T:Y.107 CDL.36: 28 residues within 4Å: Chain 9: I.19, M.20, S.22, N.23, Y.27, L.78, R.116, K.119, Y.120, L.123, I.126, I.130, M.150, L.153 Chain Y: L.19 Ligands: CDL.22, PEE.24, PLX.35 Chain e: L.354, T.357, W.358, V.361, L.369, P.371, S.372, L.445, T.448, L.449 18 PLIP interactions: 9 interactions with chain e, 9 interactions with chain 9 Hydrophobic interactions: e:W.358, e:L.369, e:P.371, e:L.445, e:L.445, e:T.448, e:L.449, 9:L.78, 9:L.123, 9:I.126, 9:I.130, 9:L.153 Hydrogen bonds: e:T.357, e:T.357, 9:Y.120 Salt bridges: 9:R.116, 9:K.119, 9:K.119 CDL.37: 30 residues within 4Å: Chain 4: F.37, C.41, L.44, A.48, V.54, V.55 Chain 6: P.238, V.239, S.242, L.243, M.245, V.246, T.334, L.335 Ligands: CDL.39 Chain b: V.17 Chain e: M.10, P.13, W.16, M.17, T.90, R.91, L.94, T.97, L.101, F.105, V.127, I.131, R.135 Chain i: Y.304 22 PLIP interactions: 10 interactions with chain e, 5 interactions with chain 6, 1 interactions with chain i, 5 interactions with chain 4, 1 interactions with chain b Hydrophobic interactions: e:P.13, e:W.16, e:W.16, e:L.94, e:T.97, e:L.101, e:F.105, e:V.127, e:I.131, 6:L.243, 6:V.246, 6:V.246, 6:T.334, 6:L.335, 4:F.37, 4:L.44, 4:A.48, 4:V.54, 4:V.54, b:V.17 Hydrogen bonds: e:T.90, i:Y.304 CDL.39: 22 residues within 4Å: Chain 4: T.28, P.30, R.31, V.33, Y.34, F.37 Chain 6: P.256, L.335, P.338 Ligands: CDL.37 Chain b: F.21, L.25, R.28 Chain e: L.2, I.6, T.9, M.108, L.121 Chain g: F.168, W.169, T.170, M.171 14 PLIP interactions: 3 interactions with chain e, 3 interactions with chain g, 3 interactions with chain 6, 3 interactions with chain 4, 2 interactions with chain b Hydrophobic interactions: e:L.2, e:I.6, e:L.121, g:F.168, 6:P.256, 6:L.335, 6:P.338, 4:V.33, 4:Y.34, 4:F.37, b:F.21 Hydrogen bonds: g:T.170, g:T.170 Salt bridges: b:R.28

1 x ZN: ZINC ION(Non-covalent)

ZN.17: 5 residues within 4Å: Chain R: C.59, G.61, H.68, C.84, C.87 3 PLIP interactions: 3 interactions with chain R Metal complexes: R:C.59, R:H.68, R:C.84

1 x UQ: Coenzyme Q10, (2Z,6E,10Z,14E,18E,22E,26Z)-isomer(Non-covalent)

UQ.38: 13 residues within 4Å: Chain C: W.23 Ligands: PEE.6 Chain f: L.14, A.18, T.21, R.25, P.48, D.51, A.52, L.55, F.220, F.224, M.225 8 PLIP interactions: 7 interactions with chain f, 1 interactions with chain C Hydrophobic interactions: f:A.18, f:A.52, f:L.55, f:F.220, C:W.23 Hydrogen bonds: f:T.21, f:R.25 pi-Stacking: f:F.224

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.40: 17 residues within 4Å: Chain i: I.31, C.32, S.33, K.35, E.53, L.79, Y.83, L.96, Q.97, L.100, R.104, R.126, D.131, F.134, M.138, K.186, E.191 13 PLIP interactions: 13 interactions with chain i Hydrogen bonds: i:N.30, i:C.32, i:Y.83, i:Q.97, i:Q.97, i:R.104, i:R.104, i:E.191 Salt bridges: i:K.35, i:K.35, i:R.126, i:K.186 pi-Stacking: i:F.134

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gu, J. et al., The coupling mechanism of mammalian mitochondrial complex I. Nat.Struct.Mol.Biol. (2022)

Release Date

2022-12-14

Peptides

NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial: A
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial: B
NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial: C
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6: D
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2: E
Acyl carrier protein: FV
Complex I subunit B13: G
Complex I-B14.5a: H
NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 9, mitochondrial: I
Complex I-9kD: J
NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial: K
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial: L
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12: M
NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial: N
Complex I-30kD: O
Complex I-49kD: P
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1: Q
NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial: R
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3: S
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11: T
Complex I-B16.6: U
Complex I-AGGG: W
Complex I-B12: X
Complex I-SGDH: Y
Complex I-B17: Z
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial: 0
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10: 1
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial: 2
Complex I-KFYI: 3
NADH dehydrogenase [ubiquinone] 1 subunit C2: 4
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5: 5
NADH-ubiquinone oxidoreductase chain 2: 6
NADH-ubiquinone oxidoreductase chain 3: 7
NADH-ubiquinone oxidoreductase chain 4L: 8
NADH-ubiquinone oxidoreductase chain 5: 9
NADH-ubiquinone oxidoreductase chain 6: a
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1: b
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4: c
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9: d
NADH-ubiquinone oxidoreductase chain 4: e
NADH-ubiquinone oxidoreductase chain 1: f
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8: g
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7: h
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial: i

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
E

E
F

F
G

V
X

G
H

H
I

I
J

J
K

K
L

L
M

M
N

N
O

O
P

P
Q

Q
S

R
T

S
U

T
V

U
W

W
Y

X
Z

Y
a

Z
b

0
c

1
d

2
e

3
f

4
g

5
h

6
i

7
j

8
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Membrane

We predict this structure to be a membrane protein.
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NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial

NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial

NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2

Acyl carrier protein

Complex I subunit B13

Complex I-B14.5a

NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 9, mitochondrial

Complex I-9kD

NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial

NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial

Complex I-30kD

Complex I-49kD

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1

NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11

Complex I-B16.6

Complex I-AGGG

Complex I-B12

Complex I-SGDH

Complex I-B17

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial

Complex I-KFYI

NADH dehydrogenase [ubiquinone] 1 subunit C2

NADH dehydrogenase [ubiquinone] iron-sulfur protein 5

NADH-ubiquinone oxidoreductase chain 2

NADH-ubiquinone oxidoreductase chain 3

NADH-ubiquinone oxidoreductase chain 4L

NADH-ubiquinone oxidoreductase chain 5

NADH-ubiquinone oxidoreductase chain 6

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9

NADH-ubiquinone oxidoreductase chain 4

NADH-ubiquinone oxidoreductase chain 1

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial

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