SMTL ID : 7w4q.1

Deactive state CI from Q1-NADH dataset, Subclass 6

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-2-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer

Ligands

6 x SF4: IRON/SULFUR CLUSTER(Non-covalent)(Covalent)

SF4.1: 10 residues within 4Å: Chain A: I.180, P.198, C.354, G.355, Q.356, C.357, C.360, T.398, C.400, L.402 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.354, A:C.357, A:C.360, A:C.400 SF4.4: 13 residues within 4Å: Chain B: C.77, I.78, A.79, C.80, K.81, C.83, I.94, Y.109, C.126, P.127, V.128, A.130, I.131 4 PLIP interactions: 4 interactions with chain B, Metal complexes: B:C.77, B:C.80, B:C.83, B:C.126 SF4.5: 12 residues within 4Å: Chain B: H.65, C.87, P.88, I.92, C.116, I.117, Y.118, C.119, G.120, F.121, C.122, E.133 5 PLIP interactions: 5 interactions with chain B, Salt bridges: B:E.133 Metal complexes: B:C.87, B:C.116, B:C.119, B:C.122 SF4.7: 11 residues within 4Å: Chain C: A.30, C.31, C.32, G.94, S.95, C.96, C.126, P.127 Chain P: R.85, R.105, H.190 5 PLIP interactions: 4 interactions with chain C, 1 interactions with chain P, Metal complexes: C:C.31, C:C.32, C:C.96, C:C.126, P:H.190 SF4.12: 11 residues within 4Å: Chain L: H.96, D.99, C.100, C.103, Q.105, G.106, C.109, L.111, Q.112, V.200, G.201 4 PLIP interactions: 4 interactions with chain L, Metal complexes: L:H.96, L:C.100, L:C.103, L:C.109 SF4.13: 12 residues within 4Å: Chain L: M.145, C.148, I.149, Q.150, C.151, T.152, R.153, C.154, V.178, C.198, V.200, L.203 4 PLIP interactions: 4 interactions with chain L, Metal complexes: L:C.148, L:C.151, L:C.154, L:C.198

1 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)

FMN.2: 18 residues within 4Å: Chain A: G.62, R.63, G.64, K.73, N.91, D.93, E.94, G.95, Y.179, G.182, E.183, E.184, V.217, A.218, N.219, A.401, L.402 Ligands: NAI.3 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:Y.179, A:E.183, A:A.401, A:L.402 Hydrogen bonds: A:G.64, A:N.91, A:E.94, A:G.95, A:N.219, A:N.219, A:T.222 Salt bridges: A:K.73

1 x NAI: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE(Non-covalent)

NAI.3: 16 residues within 4Å: Chain A: G.64, G.65, A.66, F.68, K.73, E.94, G.95, E.96, Y.179, E.184, F.204, N.219, G.325, T.326, A.401 Ligands: FMN.2 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:E.96, A:E.96 Hydrogen bonds: A:G.64, A:K.73, A:G.95, A:E.96, A:E.184, A:N.219, A:T.326 Salt bridges: A:K.201 pi-Stacking: A:F.68, A:F.204

8 x PEE: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine(Non-covalent)

PEE.6: 21 residues within 4Å: Chain B: T.24, L.25, W.27, L.30, L.34 Chain P: R.233 Chain S: E.15, I.24 Chain U: L.41 Chain f: I.175, P.180, M.183, F.186, I.187, P.197, Y.277, L.288, S.292, F.293, L.296, W.303 18 PLIP interactions: 9 interactions with chain f, 3 interactions with chain P, 1 interactions with chain S, 5 interactions with chain B Hydrophobic interactions: f:I.175, f:P.180, f:P.180, f:F.186, f:F.186, f:I.187, f:P.197, f:Y.277, f:F.293, B:W.27, B:W.27, B:L.30, B:L.30, B:L.34 Hydrogen bonds: P:R.233, P:N.237, S:E.15 Salt bridges: P:R.233 PEE.8: 12 residues within 4Å: Chain 7: L.27, N.28, A.29 Chain C: L.10, L.150, W.153, R.156 Chain I: D.55 Ligands: PLX.16, UQ.36 Chain f: L.53, F.56 5 PLIP interactions: 3 interactions with chain C, 1 interactions with chain f, 1 interactions with chain 7 Hydrophobic interactions: C:L.10, C:L.150, f:F.56, 7:L.27 Salt bridges: C:R.156 PEE.18: 20 residues within 4Å: Chain 6: L.170, M.284, T.285, L.287, L.288, Y.291, R.295 Chain 9: P.563, T.566, S.567, Q.570, M.571 Chain P: Q.13, Y.20 Ligands: PEE.31 Chain e: N.144, Y.148, F.151, Y.152, A.155 15 PLIP interactions: 2 interactions with chain 9, 9 interactions with chain 6, 3 interactions with chain e, 1 interactions with chain P Hydrophobic interactions: 9:T.566, 9:Q.570, 6:L.170, 6:L.287, 6:L.288, 6:Y.291, 6:Y.291, 6:Y.291, e:Y.148, e:F.151, e:Y.152 Hydrogen bonds: 6:Y.291, 6:Y.291, 6:R.295, P:Q.13 PEE.28: 15 residues within 4Å: Chain 0: N.85, R.86 Chain 9: T.166, Q.170, L.173, Y.174, L.218, G.228, L.229, M.533, H.534, T.538, N.541 Chain e: M.401, L.405 11 PLIP interactions: 9 interactions with chain 9, 1 interactions with chain e, 1 interactions with chain 0 Hydrophobic interactions: 9:L.173, 9:L.173, 9:L.218, 9:H.534, 9:T.538, e:L.405, 0:R.86 Hydrogen bonds: 9:D.163, 9:Q.170 Salt bridges: 9:H.534, 9:H.534 PEE.29: 13 residues within 4Å: Chain 9: W.66, H.67, W.68, L.78, I.142 Chain Z: I.80, Y.84, H.88, K.92 Ligands: CDL.21, CDL.26, PLX.33 Chain e: L.449 7 PLIP interactions: 4 interactions with chain 9, 1 interactions with chain e, 2 interactions with chain Z Hydrophobic interactions: 9:W.66, 9:W.68, 9:L.78, 9:I.142, e:L.449, Z:Y.84 Salt bridges: Z:K.92 PEE.30: 22 residues within 4Å: Chain 7: I.3, M.4, L.7 Chain Q: A.39 Chain U: F.138, I.139, W.140, Y.141, T.142 Chain a: I.34, G.38, G.42, L.45, N.46, S.50, L.54, F.57 Chain f: M.98, N.99, F.104, M.108, L.111 12 PLIP interactions: 5 interactions with chain a, 4 interactions with chain f, 2 interactions with chain 7, 1 interactions with chain U Hydrophobic interactions: a:I.34, a:L.45, a:L.45, a:F.57, f:F.104, f:F.104, f:L.111, 7:I.3, 7:L.7 Hydrogen bonds: a:S.50, f:N.99, U:Y.141 PEE.31: 17 residues within 4Å: Chain 6: E.274, I.276, I.277 Chain T: E.130, W.132 Ligands: PEE.18, PLX.32 Chain e: A.155, V.162, A.163, Y.166, S.191, F.194, M.195, L.197, A.198, M.201 8 PLIP interactions: 2 interactions with chain T, 5 interactions with chain e, 1 interactions with chain 6 Hydrophobic interactions: T:W.132, e:V.162, e:A.163, e:F.194, e:F.194, e:L.197, 6:I.276 Hydrogen bonds: T:E.130 PEE.35: 14 residues within 4Å: Chain 7: A.99, L.102, A.103, W.106 Chain S: F.7, A.11, L.18, V.19, F.22, A.23, G.25, I.29 Chain f: K.291, P.295 15 PLIP interactions: 7 interactions with chain S, 6 interactions with chain 7, 2 interactions with chain f Hydrophobic interactions: S:F.7, S:A.11, S:V.19, S:F.22, S:F.22, S:A.23, S:I.29, 7:A.99, 7:L.102, 7:A.103, 7:W.106, 7:W.106, f:P.295 Hydrogen bonds: 7:W.106 Salt bridges: f:K.291

2 x 8Q1: S-[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] dodecanethioate(Covalent)

8Q1.9: 13 residues within 4Å: Chain D: K.16, V.19, V.50, M.53, F.54, N.57, A.58, V.60, L.69, F.93 Chain F: D.43, S.44, L.45 10 PLIP interactions: 2 interactions with chain F, 8 interactions with chain D Hydrogen bonds: F:S.44, F:L.45, D:K.16, D:N.57, D:A.58 Hydrophobic interactions: D:M.53, D:F.54, D:V.60, D:F.93 Salt bridges: D:K.16 8Q1.20: 18 residues within 4Å: Chain 9: Y.515 Chain V: D.43, S.44, L.45 Chain d: H.11, Q.12, A.22, M.43, R.46, F.47, H.50, K.51, A.59, L.62, A.66, E.69, F.70, G.73 7 PLIP interactions: 5 interactions with chain d, 2 interactions with chain V Hydrophobic interactions: d:A.22, d:K.51, d:E.69, d:F.70 Hydrogen bonds: d:Q.12, V:S.44, V:L.45

6 x CDL: CARDIOLIPIN(Non-covalent)

CDL.10: 16 residues within 4Å: Chain H: S.2, A.3, T.4, V.6, I.7 Chain M: L.2, V.5, G.9, Q.12, Y.22 Chain Q: M.1, W.2, F.3, L.6, P.7 Chain f: Y.43 9 PLIP interactions: 3 interactions with chain H, 4 interactions with chain Q, 2 interactions with chain M Hydrophobic interactions: H:V.6, Q:W.2, Q:F.3, Q:L.6, Q:P.7, M:L.2 Hydrogen bonds: H:T.4, H:T.4, M:Q.12 CDL.21: 27 residues within 4Å: Chain 1: P.43, V.44, R.48, I.51 Chain 2: L.52, S.56, A.60, Y.61 Chain 9: L.9, T.13, F.80 Chain Y: L.27, G.30, A.34, T.38, N.41, V.42, E.46, H.66 Chain Z: W.79, I.80, I.81, Y.83, Y.84, H.88 Ligands: PEE.29, PLX.33 21 PLIP interactions: 6 interactions with chain Y, 4 interactions with chain 1, 7 interactions with chain Z, 2 interactions with chain 2, 2 interactions with chain 9 Hydrophobic interactions: Y:L.27, Y:A.34, 1:P.43, 1:V.44, 1:I.51, Z:W.79, Z:I.80, Z:I.81, Z:Y.83, Z:Y.83, Z:Y.84, 2:A.60, 9:L.9, 9:F.80 Hydrogen bonds: Y:N.41, Y:E.46, Y:E.46, 1:R.48, 2:Y.61 Salt bridges: Y:H.66, Z:H.88 CDL.24: 15 residues within 4Å: Chain 6: Y.6, T.7, T.8, I.10, M.14, Q.125, L.129, T.132, W.133, I.209, L.213, I.220, K.321 Chain i: P.5, V.9 9 PLIP interactions: 8 interactions with chain 6, 1 interactions with chain i Hydrophobic interactions: 6:I.10, 6:L.129, 6:W.133, 6:I.209, i:V.9 Hydrogen bonds: 6:T.7, 6:Q.125 Salt bridges: 6:K.46, 6:K.321 CDL.26: 28 residues within 4Å: Chain 9: T.16, I.19, M.20, S.22, Y.27, L.78, R.116, K.119, Y.120, L.123, I.126, I.130, I.142, G.146, I.149, M.150, L.153 Chain Y: L.19 Ligands: PEE.29, PLX.33 Chain e: L.354, T.357, W.358, P.370, P.371, S.372, L.445, T.448 18 PLIP interactions: 13 interactions with chain 9, 5 interactions with chain e Hydrophobic interactions: 9:T.16, 9:L.78, 9:I.126, 9:I.130, 9:I.142, 9:I.149, 9:L.153, e:W.358, e:L.445, e:T.448 Hydrogen bonds: 9:Y.27, 9:R.116, 9:Y.120, e:T.357, e:T.357 Salt bridges: 9:K.119, 9:K.119, 9:K.119 CDL.27: 19 residues within 4Å: Chain 0: F.106, F.109 Chain 9: L.286, L.290, I.293, T.294, S.417, L.418, A.421, R.425, F.429, V.493, L.500, L.504, K.514, P.516, S.517, T.519, Y.520 17 PLIP interactions: 3 interactions with chain 0, 14 interactions with chain 9 Hydrophobic interactions: 0:F.106, 0:F.106, 0:F.109, 9:L.286, 9:I.293, 9:I.293, 9:T.294, 9:L.418, 9:A.421, 9:V.493, 9:L.500, 9:L.500 Hydrogen bonds: 9:S.517, 9:S.517, 9:Y.520 Salt bridges: 9:R.425, 9:K.514 CDL.34: 32 residues within 4Å: Chain 4: F.38, C.42, L.45, I.46, A.49, V.55, V.56 Chain 6: P.238, V.239, S.242, L.243, M.245, V.246, L.257, T.334, L.335 Chain e: M.10, P.13, W.16, M.17, T.90, R.91, L.94, T.97, M.98, L.101, L.104, F.105, V.127, I.131, R.135 Chain i: Y.304 24 PLIP interactions: 9 interactions with chain e, 6 interactions with chain 6, 6 interactions with chain 4, 3 interactions with chain i Hydrophobic interactions: e:P.13, e:W.16, e:T.97, e:L.101, e:L.104, e:F.105, e:F.105, e:V.127, e:I.131, 6:L.243, 6:V.246, 6:V.246, 6:L.257, 6:T.334, 6:L.335, 4:F.38, 4:L.45, 4:I.46, 4:A.49, 4:V.55 Hydrogen bonds: 4:V.55, i:Y.304, i:Y.304 Salt bridges: i:K.303

1 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NDP.11: 24 residues within 4Å: Chain C: R.156 Chain I: G.25, T.27, G.28, F.29, L.30, R.50, C.51, W.73, L.94, V.95, G.96, R.97, F.104, V.109, F.110, I.113, I.132, H.134, Y.145, P.168, D.170, I.171, R.177 24 PLIP interactions: 23 interactions with chain I, 1 interactions with chain C Hydrophobic interactions: I:P.168, I:I.171 Hydrogen bonds: I:T.27, I:T.27, I:T.27, I:T.27, I:F.29, I:L.30, I:G.31, I:R.50, I:R.50, I:L.94, I:G.96, I:R.97, I:D.170, I:D.170, I:I.171 Salt bridges: I:R.50, I:R.97, I:R.97, I:R.177, C:R.156 pi-Cation interactions: I:R.50, I:R.50

2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)

FES.14: 8 residues within 4Å: Chain L: R.34, C.36, Y.37, G.45, C.47, R.48, C.50, C.64 4 PLIP interactions: 4 interactions with chain L, Metal complexes: L:C.36, L:C.47, L:C.50, L:C.64 FES.17: 9 residues within 4Å: Chain N: C.103, T.105, P.107, C.108, C.144, L.145, G.146, A.147, C.148 4 PLIP interactions: 4 interactions with chain N, Metal complexes: N:C.103, N:C.108, N:C.144, N:C.148

1 x MG: MAGNESIUM ION(Non-covalent)

MG.15: 5 residues within 4Å: Chain L: Q.105, I.195, C.198, V.200, L.203 2 PLIP interactions: 2 interactions with chain L Metal complexes: L:I.195, L:L.203

6 x PLX: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL(Non-covalent)

PLX.16: 12 residues within 4Å: Chain C: L.10, D.12, L.13, W.16, R.19, K.145 Chain M: F.27, R.28, N.30, W.74 Ligands: PEE.8 Chain f: I.49 9 PLIP interactions: 8 interactions with chain C, 1 interactions with chain f Hydrophobic interactions: C:L.10, C:D.12, C:W.16, C:W.16, f:I.49 Salt bridges: C:R.19, C:R.19, C:K.145, C:K.145 PLX.22: 12 residues within 4Å: Chain 2: F.46, T.57 Chain Y: V.33, W.71, R.74, T.75, F.76, D.78 Chain b: R.27 Chain e: K.3, L.36, S.40 9 PLIP interactions: 1 interactions with chain b, 3 interactions with chain 2, 3 interactions with chain Y, 2 interactions with chain e Hydrogen bonds: b:R.27 Hydrophobic interactions: 2:F.46, 2:F.46, 2:T.57, Y:V.33, Y:W.71, e:L.36, e:L.36 Salt bridges: Y:D.78 PLX.23: 19 residues within 4Å: Chain 4: S.5, R.10, P.12, L.13, F.15, F.73, L.77, R.80 Chain 5: P.1, F.3 Chain 6: I.202, L.203, I.207, T.210, M.261, L.332, M.339, L.346, N.347 13 PLIP interactions: 7 interactions with chain 4, 6 interactions with chain 6 Hydrophobic interactions: 4:F.15, 4:F.73, 4:F.73, 4:L.77, 4:L.77, 6:L.203, 6:I.207, 6:T.210, 6:L.332, 6:L.332, 6:N.347 Salt bridges: 4:R.10, 4:R.80 PLX.25: 10 residues within 4Å: Chain 5: L.13 Chain 7: N.83, T.86, F.93 Chain a: S.148, Y.149, T.151, W.152, I.155, W.159 8 PLIP interactions: 2 interactions with chain 7, 5 interactions with chain a, 1 interactions with chain 5 Hydrophobic interactions: 7:F.93, a:W.152, a:W.152, a:I.155, a:W.159, 5:L.13 Hydrogen bonds: 7:T.86 pi-Cation interactions: a:Y.149 PLX.32: 14 residues within 4Å: Chain T: F.90, L.119 Ligands: PEE.31 Chain e: N.188, S.189, W.190, I.193, M.201, L.212, Y.256, M.257, P.260, F.261, L.264 11 PLIP interactions: 7 interactions with chain e, 4 interactions with chain T Hydrophobic interactions: e:W.190, e:I.193, e:Y.256, e:P.260, e:F.261, e:L.264, T:F.90, T:F.90, T:L.119 pi-Cation interactions: e:W.190 Hydrogen bonds: T:D.85 PLX.33: 19 residues within 4Å: Chain 2: S.56, V.59, A.60, Y.61 Chain 9: M.20, N.23, W.66 Ligands: CDL.21, CDL.26, PEE.29 Chain e: L.39, V.67, W.71, I.317, L.446, L.447, L.449, N.450, I.454 7 PLIP interactions: 6 interactions with chain e, 1 interactions with chain 2 Hydrophobic interactions: e:L.39, e:V.67, e:W.71, e:I.317, e:I.454, 2:V.59 Hydrogen bonds: e:N.450

1 x ZN: ZINC ION(Non-covalent)

ZN.19: 5 residues within 4Å: Chain R: C.59, G.61, H.68, C.84, C.87 3 PLIP interactions: 3 interactions with chain R Metal complexes: R:C.59, R:H.68, R:C.84

1 x UQ: Coenzyme Q10, (2Z,6E,10Z,14E,18E,22E,26Z)-isomer(Non-covalent)

UQ.36: 13 residues within 4Å: Chain C: W.23 Ligands: PEE.8 Chain f: L.14, L.15, A.18, T.21, R.25, D.51, A.52, L.55, F.220, F.224, M.225 13 PLIP interactions: 12 interactions with chain f, 1 interactions with chain C Hydrophobic interactions: f:L.14, f:L.15, f:A.18, f:D.51, f:A.52, f:L.55, f:F.220, f:F.224, f:F.224, C:W.23 Hydrogen bonds: f:T.21, f:R.25 pi-Stacking: f:F.224

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.37: 14 residues within 4Å: Chain i: I.31, C.32, S.33, K.35, E.53, L.79, F.82, Y.83, Q.97, L.100, R.104, R.126, F.134, E.191 11 PLIP interactions: 11 interactions with chain i Hydrogen bonds: i:C.32, i:Y.83, i:Q.97, i:Q.97, i:R.104, i:R.104, i:E.191 Salt bridges: i:K.35, i:R.126 pi-Stacking: i:F.134, i:F.134

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gu, J. et al., The coupling mechanism of mammalian mitochondrial complex I. Nat.Struct.Mol.Biol. (2022)

Release Date

2023-01-25

Peptides

NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial: A
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial: B
NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial: C
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6: D
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2: E
Acyl carrier protein: FV
Complex I subunit B13: G
Complex I-B14.5a: H
NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 9, mitochondrial: I
Complex I-9kD: J
NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial: K
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial: L
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12: M
NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial: N
Complex I-30kD: O
Complex I-49kD: P
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1: Q
NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial: R
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3: S
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11: T
Complex I-B16.6: U
Complex I-AGGG: W
Complex I-B12: X
Complex I-SGDH: Y
Complex I-B17: Z
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial: 0
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10: 1
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial: 2
NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial: 3
NADH dehydrogenase [ubiquinone] 1 subunit C2: 4
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5: 5
NADH-ubiquinone oxidoreductase chain 2: 6
NADH-ubiquinone oxidoreductase chain 3: 7
NADH-ubiquinone oxidoreductase chain 4L: 8
NADH-ubiquinone oxidoreductase chain 5: 9
NADH-ubiquinone oxidoreductase chain 6: a
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1: b
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4: c
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9: d
NADH-ubiquinone oxidoreductase chain 4: e
NADH-ubiquinone oxidoreductase chain 1: f
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8: g
Complex I-B18: h
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial: i

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
E

E
F

F
G

V
X

G
H

H
I

I
J

J
K

K
L

L
M

M
N

N
O

O
P

P
Q

Q
S

R
T

S
U

T
V

U
W

W
Y

X
Z

Y
a

Z
b

0
c

1
d

2
e

3
f

4
g

5
h

6
i

7
j

8
k

9
l

a
m

b
n

c
o

d
p

e
r

f
s

g
u

h
v

i
w

Membrane

We predict this structure to be a membrane protein.
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NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial

NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial

NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2

Acyl carrier protein

Complex I subunit B13

Complex I-B14.5a

NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 9, mitochondrial

Complex I-9kD

NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial

NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial

Complex I-30kD

Complex I-49kD

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1

NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11

Complex I-B16.6

Complex I-AGGG

Complex I-B12

Complex I-SGDH

Complex I-B17

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial

NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial

NADH dehydrogenase [ubiquinone] 1 subunit C2

NADH dehydrogenase [ubiquinone] iron-sulfur protein 5

NADH-ubiquinone oxidoreductase chain 2

NADH-ubiquinone oxidoreductase chain 3

NADH-ubiquinone oxidoreductase chain 4L

NADH-ubiquinone oxidoreductase chain 5

NADH-ubiquinone oxidoreductase chain 6

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9

NADH-ubiquinone oxidoreductase chain 4

NADH-ubiquinone oxidoreductase chain 1

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8

Complex I-B18

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial

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