SMTL ID : 7y2d.1

HSA-Cu agent complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

6 x PLM: PALMITIC ACID(Non-covalent)

PLM.1: 7 residues within 4Å: Chain A: R.115, L.133, Y.136, A.156, Y.159, F.163, R.184 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.136, A:Y.136, A:Y.136, A:A.156, A:Y.159, A:Y.159, A:Y.159, A:F.163 Salt bridges: A:R.115, A:R.184 PLM.2: 14 residues within 4Å: Chain A: L.12, V.21, V.44, L.64, L.67, F.68, Y.148, L.249, A.252, R.255, A.256, L.281, L.282, S.285 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.12, A:V.21, A:V.44, A:L.64, A:L.67, A:F.68, A:A.252, A:L.281, A:L.282 Hydrogen bonds: A:Y.148, A:S.285 Water bridges: A:S.285, A:H.286 Salt bridges: A:R.255 PLM.3: 16 residues within 4Å: Chain A: S.340, V.342, L.343, R.346, P.382, L.385, I.386, N.389, L.428, G.432, C.436, M.444, E.448, L.451, R.483 Ligands: PLM.4 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.342, A:L.385, A:I.386, A:N.389, A:E.448 Hydrogen bonds: A:S.340 Salt bridges: A:R.346, A:R.483 PLM.4: 12 residues within 4Å: Chain A: L.385, R.408, Y.409, V.416, L.455, L.458, L.461, H.462, R.483, F.486, S.487 Ligands: PLM.3 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.409, A:Y.409, A:V.416, A:L.455, A:L.458, A:L.461, A:H.462, A:F.486 Hydrogen bonds: A:Y.409, A:S.487 Salt bridges: A:R.408 PLM.5: 14 residues within 4Å: Chain A: Y.399, N.403, F.500, F.505, K.523, A.526, L.530, H.533, M.546, F.549, A.550, L.573, S.577, Q.578 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:F.500, A:F.505, A:A.526, A:L.530, A:F.549, A:F.549, A:L.573, A:Q.578 Hydrogen bonds: A:M.546 Salt bridges: A:K.523 PLM.6: 10 residues within 4Å: Chain A: R.207, A.208, V.214, F.226, S.230, D.322, L.325, G.326, K.349, E.352 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:A.208, A:F.226, A:L.325 Hydrogen bonds: A:R.207

2 x IC4: 13-methoxy-~{N},~{N}-dimethyl-2-oxa-4-thia-6,7$l^{4}-diaza-3$l^{3}-cupratricyclo[7.4.0.0^{3,7}]trideca-1(9),5,7,10,12-pentaen-5-amine(Non-covalent)

IC4.7: 9 residues within 4Å: Chain A: R.112, L.113, I.140, R.143, H.144, F.147, L.152, Y.159, G.187 3 PLIP interactions: 3 interactions with chain A, Hydrophobic interactions: A:I.140, A:Y.159 Metal complexes: A:H.144 IC4.8: 13 residues within 4Å: Chain A: K.197, F.209, W.212, A.213, R.216, L.217, R.220, L.236, H.240, R.255, L.258, S.285, A.289 6 PLIP interactions: 6 interactions with chain A, Hydrophobic interactions: A:A.213, A:R.216, A:L.217, A:L.236 Hydrogen bonds: A:K.197 Metal complexes: A:H.240

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Z.L. et al., Structure of HSA-Cu agent complex. To Be Published

Release Date

2023-07-05

Peptides

Serum albumin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serum albumin

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