SMTL ID : 7zb0.2 (3 other biounits)

macrocyclase OphP with 15mer

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.47 Å

Oligo State

hetero-1-1-mer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 6 residues within 4Å: Chain A: L.398, I.401, Y.436, E.441, K.442, G.443 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.436, A:K.442, A:K.442, A:G.443

1 x BCT: BICARBONATE ION(Non-functional Binders)

BCT.2: 5 residues within 4Å: Chain A: Y.101, L.123, T.124, E.125, G.127 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.127

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Matabaro, E. et al., Molecular basis for the enzymatic macrocyclization of multiply backbone N-methylated peptides. Biorxiv (2022)

Release Date

2022-07-06

Peptides

Prolyl endopeptidase: A
15mer: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
F

Prolyl endopeptidase

15mer

Related Entries With Identical Sequence